Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC20.79■□□□□ 0.92
UBE2OQ9C0C9 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
UBE2OQ9C0C9 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
UBE2OQ9C0C9 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
UBE2OQ9C0C9 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.79■□□□□ 0.92
UBE2OQ9C0C9 AL157384.1-201ENST00000445995 2473 ntBASIC20.79■□□□□ 0.92
UBE2OQ9C0C9 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
UBE2OQ9C0C9 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.79■□□□□ 0.92
UBE2OQ9C0C9 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
UBE2OQ9C0C9 BX842568.4-201ENST00000421222 227 ntBASIC20.79■□□□□ 0.92
UBE2OQ9C0C9 AC074051.2-201ENST00000565115 352 ntBASIC20.79■□□□□ 0.92
UBE2OQ9C0C9 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC20.79■□□□□ 0.92
UBE2OQ9C0C9 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
UBE2OQ9C0C9 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.79■□□□□ 0.92
UBE2OQ9C0C9 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.79■□□□□ 0.92
UBE2OQ9C0C9 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
UBE2OQ9C0C9 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
UBE2OQ9C0C9 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC20.78■□□□□ 0.92
UBE2OQ9C0C9 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
UBE2OQ9C0C9 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBE2OQ9C0C9 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBE2OQ9C0C9 SMG8-203ENST00000578922 2178 ntBASIC20.78■□□□□ 0.92
UBE2OQ9C0C9 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.78■□□□□ 0.92
UBE2OQ9C0C9 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.78■□□□□ 0.92
UBE2OQ9C0C9 TLE1-202ENST00000376484 666 ntTSL 3 BASIC20.78■□□□□ 0.92
UBE2OQ9C0C9 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBE2OQ9C0C9 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
UBE2OQ9C0C9 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC20.78■□□□□ 0.92
UBE2OQ9C0C9 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC20.78■□□□□ 0.92
UBE2OQ9C0C9 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC20.78■□□□□ 0.92
UBE2OQ9C0C9 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
UBE2OQ9C0C9 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.78■□□□□ 0.92
UBE2OQ9C0C9 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.78■□□□□ 0.92
UBE2OQ9C0C9 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC20.78■□□□□ 0.92
UBE2OQ9C0C9 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
UBE2OQ9C0C9 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBE2OQ9C0C9 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
UBE2OQ9C0C9 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBE2OQ9C0C9 FEM1AP1-201ENST00000431297 1995 ntBASIC20.77■□□□□ 0.92
UBE2OQ9C0C9 AC020907.5-201ENST00000624372 1936 ntBASIC20.77■□□□□ 0.92
UBE2OQ9C0C9 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
UBE2OQ9C0C9 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC20.77■□□□□ 0.92
UBE2OQ9C0C9 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
UBE2OQ9C0C9 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC20.77■□□□□ 0.92
UBE2OQ9C0C9 PPIE-208ENST00000470213 927 ntTSL 3 BASIC20.77■□□□□ 0.92
UBE2OQ9C0C9 AL355385.1-201ENST00000606123 409 ntBASIC20.77■□□□□ 0.92
UBE2OQ9C0C9 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20.77■□□□□ 0.92
UBE2OQ9C0C9 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.77■□□□□ 0.92
UBE2OQ9C0C9 ABBA01031661.1-201ENST00000634362 1253 ntBASIC20.77■□□□□ 0.92
UBE2OQ9C0C9 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
UBE2OQ9C0C9 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.77■□□□□ 0.92
UBE2OQ9C0C9 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
UBE2OQ9C0C9 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
UBE2OQ9C0C9 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
UBE2OQ9C0C9 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
UBE2OQ9C0C9 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
UBE2OQ9C0C9 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
UBE2OQ9C0C9 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
UBE2OQ9C0C9 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
UBE2OQ9C0C9 PMS2P7-201ENST00000506558 1336 ntBASIC20.77■□□□□ 0.91
UBE2OQ9C0C9 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC20.77■□□□□ 0.91
UBE2OQ9C0C9 AC022898.2-201ENST00000616822 1312 ntBASIC20.77■□□□□ 0.91
UBE2OQ9C0C9 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.77■□□□□ 0.91
UBE2OQ9C0C9 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBE2OQ9C0C9 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.76■□□□□ 0.91
UBE2OQ9C0C9 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBE2OQ9C0C9 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBE2OQ9C0C9 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC20.76■□□□□ 0.91
UBE2OQ9C0C9 MOK-208ENST00000519058 917 ntTSL 2 BASIC20.76■□□□□ 0.91
UBE2OQ9C0C9 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC20.76■□□□□ 0.91
UBE2OQ9C0C9 AC099336.1-202ENST00000602961 463 ntBASIC20.76■□□□□ 0.91
UBE2OQ9C0C9 AC079602.3-201ENST00000623931 403 ntBASIC20.76■□□□□ 0.91
UBE2OQ9C0C9 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.76■□□□□ 0.91
UBE2OQ9C0C9 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBE2OQ9C0C9 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.76■□□□□ 0.91
UBE2OQ9C0C9 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
UBE2OQ9C0C9 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBE2OQ9C0C9 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBE2OQ9C0C9 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
UBE2OQ9C0C9 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBE2OQ9C0C9 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.75■□□□□ 0.91
UBE2OQ9C0C9 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.75■□□□□ 0.91
UBE2OQ9C0C9 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBE2OQ9C0C9 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
UBE2OQ9C0C9 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
UBE2OQ9C0C9 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
UBE2OQ9C0C9 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.75■□□□□ 0.91
UBE2OQ9C0C9 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBE2OQ9C0C9 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.75■□□□□ 0.91
UBE2OQ9C0C9 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBE2OQ9C0C9 HLA-F-220ENST00000434407 884 ntBASIC20.75■□□□□ 0.91
UBE2OQ9C0C9 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC20.75■□□□□ 0.91
UBE2OQ9C0C9 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC20.75■□□□□ 0.91
UBE2OQ9C0C9 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC20.75■□□□□ 0.91
UBE2OQ9C0C9 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBE2OQ9C0C9 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC20.75■□□□□ 0.91
UBE2OQ9C0C9 TERC-201ENST00000602385 541 ntBASIC20.75■□□□□ 0.91
UBE2OQ9C0C9 AL139424.1-201ENST00000607572 797 ntBASIC20.75■□□□□ 0.91
UBE2OQ9C0C9 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.75■□□□□ 0.91
UBE2OQ9C0C9 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms