Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.68■□□□□ 0.42
AMBRA1Q9C0C7 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.68■□□□□ 0.42
AMBRA1Q9C0C7 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
AMBRA1Q9C0C7 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
AMBRA1Q9C0C7 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
AMBRA1Q9C0C7 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
AMBRA1Q9C0C7 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.68■□□□□ 0.42
AMBRA1Q9C0C7 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
AMBRA1Q9C0C7 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
AMBRA1Q9C0C7 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AMBRA1Q9C0C7 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
AMBRA1Q9C0C7 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
AMBRA1Q9C0C7 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.67■□□□□ 0.42
AMBRA1Q9C0C7 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
AMBRA1Q9C0C7 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
AMBRA1Q9C0C7 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
AMBRA1Q9C0C7 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AMBRA1Q9C0C7 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.67■□□□□ 0.42
AMBRA1Q9C0C7 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
AMBRA1Q9C0C7 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
AMBRA1Q9C0C7 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.67■□□□□ 0.42
AMBRA1Q9C0C7 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
AMBRA1Q9C0C7 AC026366.1-201ENST00000488803 879 ntBASIC17.67■□□□□ 0.42
AMBRA1Q9C0C7 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.67■□□□□ 0.42
AMBRA1Q9C0C7 AP003097.1-201ENST00000530657 1135 ntBASIC17.67■□□□□ 0.42
AMBRA1Q9C0C7 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.67■□□□□ 0.42
AMBRA1Q9C0C7 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
AMBRA1Q9C0C7 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.67■□□□□ 0.42
AMBRA1Q9C0C7 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AMBRA1Q9C0C7 AC120498.8-201ENST00000614275 531 ntBASIC17.67■□□□□ 0.42
AMBRA1Q9C0C7 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AMBRA1Q9C0C7 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
AMBRA1Q9C0C7 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.67■□□□□ 0.42
AMBRA1Q9C0C7 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
AMBRA1Q9C0C7 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
AMBRA1Q9C0C7 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
AMBRA1Q9C0C7 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AMBRA1Q9C0C7 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.67■□□□□ 0.42
AMBRA1Q9C0C7 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.67■□□□□ 0.42
AMBRA1Q9C0C7 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AMBRA1Q9C0C7 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.66■□□□□ 0.42
AMBRA1Q9C0C7 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
AMBRA1Q9C0C7 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AMBRA1Q9C0C7 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AMBRA1Q9C0C7 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.66■□□□□ 0.42
AMBRA1Q9C0C7 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
AMBRA1Q9C0C7 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AMBRA1Q9C0C7 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AMBRA1Q9C0C7 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AMBRA1Q9C0C7 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AMBRA1Q9C0C7 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.66■□□□□ 0.42
AMBRA1Q9C0C7 ESRRAP1-201ENST00000400596 1257 ntBASIC17.66■□□□□ 0.42
AMBRA1Q9C0C7 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.66■□□□□ 0.42
AMBRA1Q9C0C7 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.66■□□□□ 0.42
AMBRA1Q9C0C7 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.66■□□□□ 0.42
AMBRA1Q9C0C7 UNC93B4-201ENST00000505679 747 ntBASIC17.66■□□□□ 0.42
AMBRA1Q9C0C7 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.66■□□□□ 0.42
AMBRA1Q9C0C7 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.66■□□□□ 0.42
AMBRA1Q9C0C7 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
AMBRA1Q9C0C7 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AMBRA1Q9C0C7 ANO7L1-203ENST00000602586 1720 ntBASIC17.66■□□□□ 0.42
AMBRA1Q9C0C7 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.66■□□□□ 0.42
AMBRA1Q9C0C7 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
AMBRA1Q9C0C7 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
AMBRA1Q9C0C7 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
AMBRA1Q9C0C7 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
AMBRA1Q9C0C7 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.66■□□□□ 0.42
AMBRA1Q9C0C7 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.65■□□□□ 0.42
AMBRA1Q9C0C7 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
AMBRA1Q9C0C7 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.65■□□□□ 0.42
AMBRA1Q9C0C7 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
AMBRA1Q9C0C7 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AMBRA1Q9C0C7 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.65■□□□□ 0.42
AMBRA1Q9C0C7 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
AMBRA1Q9C0C7 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AMBRA1Q9C0C7 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
AMBRA1Q9C0C7 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
AMBRA1Q9C0C7 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AMBRA1Q9C0C7 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.65■□□□□ 0.42
AMBRA1Q9C0C7 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
AMBRA1Q9C0C7 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
AMBRA1Q9C0C7 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.65■□□□□ 0.42
AMBRA1Q9C0C7 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
AMBRA1Q9C0C7 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
AMBRA1Q9C0C7 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.65■□□□□ 0.42
AMBRA1Q9C0C7 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.65■□□□□ 0.42
AMBRA1Q9C0C7 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.65■□□□□ 0.42
AMBRA1Q9C0C7 AC008403.3-201ENST00000598924 454 ntBASIC17.65■□□□□ 0.42
AMBRA1Q9C0C7 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.65■□□□□ 0.42
AMBRA1Q9C0C7 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
AMBRA1Q9C0C7 AL121829.2-201ENST00000620908 328 ntBASIC17.65■□□□□ 0.42
AMBRA1Q9C0C7 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
AMBRA1Q9C0C7 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.65■□□□□ 0.42
AMBRA1Q9C0C7 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AMBRA1Q9C0C7 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.65■□□□□ 0.42
AMBRA1Q9C0C7 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
AMBRA1Q9C0C7 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.65■□□□□ 0.42
AMBRA1Q9C0C7 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.65■□□□□ 0.42
AMBRA1Q9C0C7 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AMBRA1Q9C0C7 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms