Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LIMD2Q9BT23 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC11.25□□□□□ -0.61
LIMD2Q9BT23 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC11.25□□□□□ -0.61
LIMD2Q9BT23 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
LIMD2Q9BT23 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC11.25□□□□□ -0.61
LIMD2Q9BT23 MAP2K4P1-201ENST00000438453 1195 ntBASIC11.25□□□□□ -0.61
LIMD2Q9BT23 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC11.25□□□□□ -0.61
LIMD2Q9BT23 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC11.25□□□□□ -0.61
LIMD2Q9BT23 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC11.25□□□□□ -0.61
LIMD2Q9BT23 NME1-207ENST00000480143 964 ntTSL 2 BASIC11.25□□□□□ -0.61
LIMD2Q9BT23 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC11.25□□□□□ -0.61
LIMD2Q9BT23 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC11.25□□□□□ -0.61
LIMD2Q9BT23 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC11.25□□□□□ -0.61
LIMD2Q9BT23 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC11.25□□□□□ -0.61
LIMD2Q9BT23 INO80E-214ENST00000620599 515 ntTSL 2 BASIC11.25□□□□□ -0.61
LIMD2Q9BT23 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LIMD2Q9BT23 PRORSD1P-202ENST00000563365 2154 ntBASIC11.25□□□□□ -0.61
LIMD2Q9BT23 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LIMD2Q9BT23 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC11.25□□□□□ -0.61
LIMD2Q9BT23 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
LIMD2Q9BT23 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
LIMD2Q9BT23 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
LIMD2Q9BT23 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
LIMD2Q9BT23 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LIMD2Q9BT23 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC11.25□□□□□ -0.61
LIMD2Q9BT23 FLJ16779-201ENST00000612722 7638 ntBASIC11.25□□□□□ -0.61
LIMD2Q9BT23 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LIMD2Q9BT23 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LIMD2Q9BT23 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
LIMD2Q9BT23 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
LIMD2Q9BT23 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
LIMD2Q9BT23 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LIMD2Q9BT23 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC11.25□□□□□ -0.61
LIMD2Q9BT23 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LIMD2Q9BT23 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
LIMD2Q9BT23 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
LIMD2Q9BT23 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC11.24□□□□□ -0.61
LIMD2Q9BT23 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LIMD2Q9BT23 AL133373.2-201ENST00000623187 2828 ntBASIC11.24□□□□□ -0.61
LIMD2Q9BT23 AL049812.1-201ENST00000432563 2267 ntBASIC11.24□□□□□ -0.61
LIMD2Q9BT23 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
LIMD2Q9BT23 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
LIMD2Q9BT23 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LIMD2Q9BT23 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LIMD2Q9BT23 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LIMD2Q9BT23 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LIMD2Q9BT23 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC11.24□□□□□ -0.61
LIMD2Q9BT23 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LIMD2Q9BT23 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LIMD2Q9BT23 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
LIMD2Q9BT23 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LIMD2Q9BT23 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
LIMD2Q9BT23 TUBB8P6-201ENST00000436895 1288 ntBASIC11.24□□□□□ -0.61
LIMD2Q9BT23 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC11.24□□□□□ -0.61
LIMD2Q9BT23 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC11.24□□□□□ -0.61
LIMD2Q9BT23 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
LIMD2Q9BT23 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
LIMD2Q9BT23 AC142086.2-201ENST00000569753 217 ntBASIC11.24□□□□□ -0.61
LIMD2Q9BT23 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC11.24□□□□□ -0.61
LIMD2Q9BT23 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC11.24□□□□□ -0.61
LIMD2Q9BT23 AC004264.1-201ENST00000608354 794 ntBASIC11.24□□□□□ -0.61
LIMD2Q9BT23 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
LIMD2Q9BT23 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LIMD2Q9BT23 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC11.24□□□□□ -0.61
LIMD2Q9BT23 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
LIMD2Q9BT23 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC11.24□□□□□ -0.61
LIMD2Q9BT23 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC11.24□□□□□ -0.61
LIMD2Q9BT23 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
LIMD2Q9BT23 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
LIMD2Q9BT23 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LIMD2Q9BT23 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC11.24□□□□□ -0.61
LIMD2Q9BT23 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
LIMD2Q9BT23 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LIMD2Q9BT23 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC11.24□□□□□ -0.61
LIMD2Q9BT23 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
LIMD2Q9BT23 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
LIMD2Q9BT23 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
LIMD2Q9BT23 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
LIMD2Q9BT23 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC11.24□□□□□ -0.61
LIMD2Q9BT23 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC11.24□□□□□ -0.61
LIMD2Q9BT23 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC11.24□□□□□ -0.61
LIMD2Q9BT23 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC11.24□□□□□ -0.61
LIMD2Q9BT23 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
LIMD2Q9BT23 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LIMD2Q9BT23 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC11.23□□□□□ -0.61
LIMD2Q9BT23 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
LIMD2Q9BT23 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LIMD2Q9BT23 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LIMD2Q9BT23 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC11.23□□□□□ -0.61
LIMD2Q9BT23 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
LIMD2Q9BT23 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC11.23□□□□□ -0.61
LIMD2Q9BT23 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LIMD2Q9BT23 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LIMD2Q9BT23 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LIMD2Q9BT23 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LIMD2Q9BT23 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LIMD2Q9BT23 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
LIMD2Q9BT23 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LIMD2Q9BT23 PCDHB18P-201ENST00000524813 2368 ntBASIC11.23□□□□□ -0.61
LIMD2Q9BT23 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms