Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAD9AQ99638 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAD9AQ99638 SLC25A24-204ENST00000569674 2357 ntBASIC20.17■□□□□ 0.82
RAD9AQ99638 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RAD9AQ99638 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.17■□□□□ 0.82
RAD9AQ99638 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RAD9AQ99638 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAD9AQ99638 AL391422.3-201ENST00000603791 2761 ntBASIC20.17■□□□□ 0.82
RAD9AQ99638 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAD9AQ99638 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.17■□□□□ 0.82
RAD9AQ99638 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAD9AQ99638 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAD9AQ99638 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC20.17■□□□□ 0.82
RAD9AQ99638 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RAD9AQ99638 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RAD9AQ99638 KRT18P23-201ENST00000435622 1283 ntBASIC20.17■□□□□ 0.82
RAD9AQ99638 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RAD9AQ99638 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC20.17■□□□□ 0.82
RAD9AQ99638 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.17■□□□□ 0.82
RAD9AQ99638 AC099336.1-202ENST00000602961 463 ntBASIC20.17■□□□□ 0.82
RAD9AQ99638 AL390719.2-201ENST00000606993 987 ntBASIC20.17■□□□□ 0.82
RAD9AQ99638 AC010240.3-201ENST00000607688 395 ntBASIC20.17■□□□□ 0.82
RAD9AQ99638 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RAD9AQ99638 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAD9AQ99638 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.17■□□□□ 0.82
RAD9AQ99638 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAD9AQ99638 LINC00167-201ENST00000530583 1419 ntBASIC20.17■□□□□ 0.82
RAD9AQ99638 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAD9AQ99638 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
RAD9AQ99638 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC20.17■□□□□ 0.82
RAD9AQ99638 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAD9AQ99638 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAD9AQ99638 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAD9AQ99638 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RAD9AQ99638 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
RAD9AQ99638 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC20.16■□□□□ 0.82
RAD9AQ99638 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC20.16■□□□□ 0.82
RAD9AQ99638 AC120114.3-201ENST00000611923 658 ntBASIC20.16■□□□□ 0.82
RAD9AQ99638 AC117500.6-201ENST00000624871 588 ntBASIC20.16■□□□□ 0.82
RAD9AQ99638 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
RAD9AQ99638 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAD9AQ99638 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
RAD9AQ99638 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RAD9AQ99638 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RAD9AQ99638 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAD9AQ99638 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAD9AQ99638 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RAD9AQ99638 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAD9AQ99638 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAD9AQ99638 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.15■□□□□ 0.82
RAD9AQ99638 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
RAD9AQ99638 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.15■□□□□ 0.82
RAD9AQ99638 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
RAD9AQ99638 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC20.15■□□□□ 0.82
RAD9AQ99638 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
RAD9AQ99638 HOXB1-202ENST00000577092 1414 ntBASIC20.15■□□□□ 0.82
RAD9AQ99638 AL109659.2-201ENST00000606809 1674 ntBASIC20.15■□□□□ 0.82
RAD9AQ99638 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAD9AQ99638 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
RAD9AQ99638 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.14■□□□□ 0.81
RAD9AQ99638 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.14■□□□□ 0.81
RAD9AQ99638 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
RAD9AQ99638 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RAD9AQ99638 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC20.14■□□□□ 0.81
RAD9AQ99638 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
RAD9AQ99638 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RAD9AQ99638 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.14■□□□□ 0.81
RAD9AQ99638 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RAD9AQ99638 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RAD9AQ99638 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RAD9AQ99638 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC20.14■□□□□ 0.81
RAD9AQ99638 AL590627.1-203ENST00000421194 1026 ntBASIC20.14■□□□□ 0.81
RAD9AQ99638 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC20.14■□□□□ 0.81
RAD9AQ99638 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
RAD9AQ99638 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC20.14■□□□□ 0.81
RAD9AQ99638 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC20.14■□□□□ 0.81
RAD9AQ99638 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
RAD9AQ99638 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC20.14■□□□□ 0.81
RAD9AQ99638 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20.14■□□□□ 0.81
RAD9AQ99638 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.14■□□□□ 0.81
RAD9AQ99638 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RAD9AQ99638 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.14■□□□□ 0.81
RAD9AQ99638 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.14■□□□□ 0.81
RAD9AQ99638 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RAD9AQ99638 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RAD9AQ99638 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RAD9AQ99638 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
RAD9AQ99638 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
RAD9AQ99638 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RAD9AQ99638 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
RAD9AQ99638 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC20.13■□□□□ 0.81
RAD9AQ99638 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
RAD9AQ99638 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC20.13■□□□□ 0.81
RAD9AQ99638 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RAD9AQ99638 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.13■□□□□ 0.81
RAD9AQ99638 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
RAD9AQ99638 IGHV3-47-201ENST00000425060 335 ntBASIC20.13■□□□□ 0.81
RAD9AQ99638 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC20.13■□□□□ 0.81
RAD9AQ99638 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC20.13■□□□□ 0.81
RAD9AQ99638 AL671883.3-201ENST00000603274 991 ntBASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms