Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
GAFA1Q96PS6 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC15.72■□□□□ 0.11
GAFA1Q96PS6 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
GAFA1Q96PS6 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
GAFA1Q96PS6 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
GAFA1Q96PS6 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC15.72■□□□□ 0.11
GAFA1Q96PS6 KRT8P32-201ENST00000512863 1461 ntBASIC15.71■□□□□ 0.11
GAFA1Q96PS6 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
GAFA1Q96PS6 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
GAFA1Q96PS6 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
GAFA1Q96PS6 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
GAFA1Q96PS6 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC15.71■□□□□ 0.11
GAFA1Q96PS6 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
GAFA1Q96PS6 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
GAFA1Q96PS6 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC15.71■□□□□ 0.11
GAFA1Q96PS6 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC15.71■□□□□ 0.11
GAFA1Q96PS6 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
GAFA1Q96PS6 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
GAFA1Q96PS6 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GAFA1Q96PS6 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
GAFA1Q96PS6 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC15.71■□□□□ 0.11
GAFA1Q96PS6 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC15.71■□□□□ 0.11
GAFA1Q96PS6 TSPY17P-201ENST00000450329 467 ntBASIC15.71■□□□□ 0.11
GAFA1Q96PS6 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GAFA1Q96PS6 EGLN1P1-201ENST00000531623 762 ntBASIC15.71■□□□□ 0.11
GAFA1Q96PS6 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
GAFA1Q96PS6 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC15.71■□□□□ 0.11
GAFA1Q96PS6 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC15.71■□□□□ 0.11
GAFA1Q96PS6 AC116562.4-202ENST00000641738 218 ntBASIC15.71■□□□□ 0.11
GAFA1Q96PS6 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GAFA1Q96PS6 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GAFA1Q96PS6 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
GAFA1Q96PS6 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC15.71■□□□□ 0.11
GAFA1Q96PS6 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
GAFA1Q96PS6 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
GAFA1Q96PS6 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
GAFA1Q96PS6 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
GAFA1Q96PS6 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC15.7■□□□□ 0.1
GAFA1Q96PS6 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GAFA1Q96PS6 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
GAFA1Q96PS6 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC15.7■□□□□ 0.1
GAFA1Q96PS6 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
GAFA1Q96PS6 TNXA-203ENST00000507684 2038 ntBASIC15.7■□□□□ 0.1
GAFA1Q96PS6 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC15.7■□□□□ 0.1
GAFA1Q96PS6 AC092338.2-201ENST00000568827 1415 ntBASIC15.7■□□□□ 0.1
GAFA1Q96PS6 RCC2P3-201ENST00000418112 1537 ntBASIC15.7■□□□□ 0.1
GAFA1Q96PS6 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
GAFA1Q96PS6 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
GAFA1Q96PS6 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
GAFA1Q96PS6 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC15.7■□□□□ 0.1
GAFA1Q96PS6 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
GAFA1Q96PS6 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC15.7■□□□□ 0.1
GAFA1Q96PS6 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC15.7■□□□□ 0.1
GAFA1Q96PS6 AL353719.1-201ENST00000566847 864 ntBASIC15.7■□□□□ 0.1
GAFA1Q96PS6 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
GAFA1Q96PS6 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC15.7■□□□□ 0.1
GAFA1Q96PS6 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GAFA1Q96PS6 AC073912.3-201ENST00000624414 853 ntBASIC15.7■□□□□ 0.1
GAFA1Q96PS6 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC15.7■□□□□ 0.1
GAFA1Q96PS6 AC068587.9-201ENST00000641814 219 ntBASIC15.7■□□□□ 0.1
GAFA1Q96PS6 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
GAFA1Q96PS6 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GAFA1Q96PS6 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
GAFA1Q96PS6 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC15.7■□□□□ 0.1
GAFA1Q96PS6 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
GAFA1Q96PS6 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GAFA1Q96PS6 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GAFA1Q96PS6 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GAFA1Q96PS6 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
GAFA1Q96PS6 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
GAFA1Q96PS6 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
GAFA1Q96PS6 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC15.69■□□□□ 0.1
GAFA1Q96PS6 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GAFA1Q96PS6 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC15.69■□□□□ 0.1
GAFA1Q96PS6 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GAFA1Q96PS6 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
GAFA1Q96PS6 INGX-201ENST00000359239 846 ntBASIC15.69■□□□□ 0.1
GAFA1Q96PS6 CRAT-202ENST00000393384 973 ntTSL 2 BASIC15.69■□□□□ 0.1
GAFA1Q96PS6 AL023284.2-201ENST00000405850 579 ntBASIC15.69■□□□□ 0.1
GAFA1Q96PS6 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC15.69■□□□□ 0.1
GAFA1Q96PS6 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GAFA1Q96PS6 AC007663.1-201ENST00000438948 1240 ntBASIC15.69■□□□□ 0.1
GAFA1Q96PS6 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC15.69■□□□□ 0.1
GAFA1Q96PS6 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
GAFA1Q96PS6 AP003041.3-201ENST00000527151 707 ntBASIC15.69■□□□□ 0.1
GAFA1Q96PS6 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC15.69■□□□□ 0.1
GAFA1Q96PS6 MIR4674-201ENST00000582457 87 ntBASIC15.69■□□□□ 0.1
GAFA1Q96PS6 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
GAFA1Q96PS6 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC15.69■□□□□ 0.1
GAFA1Q96PS6 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC15.69■□□□□ 0.1
GAFA1Q96PS6 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
GAFA1Q96PS6 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
GAFA1Q96PS6 GPAT2P1-201ENST00000444924 1672 ntBASIC15.69■□□□□ 0.1
GAFA1Q96PS6 HEIH-201ENST00000623091 1652 ntBASIC15.69■□□□□ 0.1
GAFA1Q96PS6 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GAFA1Q96PS6 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC15.68■□□□□ 0.1
GAFA1Q96PS6 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GAFA1Q96PS6 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GAFA1Q96PS6 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC15.68■□□□□ 0.1
GAFA1Q96PS6 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms