Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
ALPK3Q96L96 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.61■□□□□ 0.89
ALPK3Q96L96 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ALPK3Q96L96 HOXB1-202ENST00000577092 1414 ntBASIC20.61■□□□□ 0.89
ALPK3Q96L96 PRKN-208ENST00000610470 531 ntTSL 2 BASIC20.61■□□□□ 0.89
ALPK3Q96L96 PRKN-209ENST00000612485 225 ntTSL 5 BASIC20.61■□□□□ 0.89
ALPK3Q96L96 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
ALPK3Q96L96 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ALPK3Q96L96 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC20.6■□□□□ 0.89
ALPK3Q96L96 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.6■□□□□ 0.89
ALPK3Q96L96 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ALPK3Q96L96 HES2-202ENST00000377836 507 ntTSL 2 BASIC20.6■□□□□ 0.89
ALPK3Q96L96 DNAJB3-202ENST00000449667 1266 ntBASIC20.6■□□□□ 0.89
ALPK3Q96L96 AC005332.3-201ENST00000589904 676 ntBASIC20.6■□□□□ 0.89
ALPK3Q96L96 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC20.6■□□□□ 0.89
ALPK3Q96L96 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ALPK3Q96L96 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.6■□□□□ 0.89
ALPK3Q96L96 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
ALPK3Q96L96 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ALPK3Q96L96 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ALPK3Q96L96 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ALPK3Q96L96 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ALPK3Q96L96 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ALPK3Q96L96 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ALPK3Q96L96 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.59■□□□□ 0.89
ALPK3Q96L96 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ALPK3Q96L96 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
ALPK3Q96L96 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ALPK3Q96L96 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ALPK3Q96L96 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ALPK3Q96L96 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC20.59■□□□□ 0.89
ALPK3Q96L96 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.59■□□□□ 0.89
ALPK3Q96L96 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC20.59■□□□□ 0.89
ALPK3Q96L96 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC20.59■□□□□ 0.89
ALPK3Q96L96 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ALPK3Q96L96 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.59■□□□□ 0.89
ALPK3Q96L96 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.59■□□□□ 0.89
ALPK3Q96L96 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ALPK3Q96L96 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ALPK3Q96L96 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ALPK3Q96L96 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
ALPK3Q96L96 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ALPK3Q96L96 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
ALPK3Q96L96 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ALPK3Q96L96 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ALPK3Q96L96 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ALPK3Q96L96 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ALPK3Q96L96 SCARNA2-201ENST00000458748 420 ntBASIC20.59■□□□□ 0.89
ALPK3Q96L96 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.59■□□□□ 0.89
ALPK3Q96L96 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC20.59■□□□□ 0.89
ALPK3Q96L96 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC20.59■□□□□ 0.89
ALPK3Q96L96 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ALPK3Q96L96 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.58■□□□□ 0.89
ALPK3Q96L96 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ALPK3Q96L96 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
ALPK3Q96L96 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ALPK3Q96L96 MED15P5-201ENST00000423150 992 ntBASIC20.58■□□□□ 0.88
ALPK3Q96L96 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC20.58■□□□□ 0.88
ALPK3Q96L96 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.58■□□□□ 0.88
ALPK3Q96L96 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC20.58■□□□□ 0.88
ALPK3Q96L96 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ALPK3Q96L96 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
ALPK3Q96L96 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
ALPK3Q96L96 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ALPK3Q96L96 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ALPK3Q96L96 CSF3-203ENST00000394148 622 ntTSL 3 BASIC20.57■□□□□ 0.88
ALPK3Q96L96 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC20.57■□□□□ 0.88
ALPK3Q96L96 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC20.57■□□□□ 0.88
ALPK3Q96L96 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC20.57■□□□□ 0.88
ALPK3Q96L96 RN7SL606P-201ENST00000472779 293 ntBASIC20.57■□□□□ 0.88
ALPK3Q96L96 GUSBP12-201ENST00000513727 720 ntBASIC20.57■□□□□ 0.88
ALPK3Q96L96 IRF8-202ENST00000562492 946 ntTSL 3 BASIC20.57■□□□□ 0.88
ALPK3Q96L96 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.57■□□□□ 0.88
ALPK3Q96L96 AL356488.2-201ENST00000602755 427 ntBASIC20.57■□□□□ 0.88
ALPK3Q96L96 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ALPK3Q96L96 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC20.57■□□□□ 0.88
ALPK3Q96L96 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.57■□□□□ 0.88
ALPK3Q96L96 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.57■□□□□ 0.88
ALPK3Q96L96 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ALPK3Q96L96 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.57■□□□□ 0.88
ALPK3Q96L96 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ALPK3Q96L96 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
ALPK3Q96L96 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ALPK3Q96L96 ZNF259P1-201ENST00000407656 1365 ntBASIC20.57■□□□□ 0.88
ALPK3Q96L96 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
ALPK3Q96L96 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.57■□□□□ 0.88
ALPK3Q96L96 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ALPK3Q96L96 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ALPK3Q96L96 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC20.57■□□□□ 0.88
ALPK3Q96L96 AC096582.2-201ENST00000510860 516 ntBASIC20.57■□□□□ 0.88
ALPK3Q96L96 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
ALPK3Q96L96 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
ALPK3Q96L96 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ALPK3Q96L96 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ALPK3Q96L96 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ALPK3Q96L96 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.56■□□□□ 0.88
ALPK3Q96L96 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.56■□□□□ 0.88
ALPK3Q96L96 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ALPK3Q96L96 AL691432.2-201ENST00000607222 2038 ntBASIC20.56■□□□□ 0.88
ALPK3Q96L96 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms