Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC22.45■■□□□ 1.18
SH3RF3Q8TEJ3 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
SH3RF3Q8TEJ3 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
SH3RF3Q8TEJ3 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC22.45■■□□□ 1.18
SH3RF3Q8TEJ3 AL136038.3-201ENST00000561909 1096 ntBASIC22.45■■□□□ 1.18
SH3RF3Q8TEJ3 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC22.45■■□□□ 1.18
SH3RF3Q8TEJ3 FGF14-AS2-201ENST00000606448 1074 ntBASIC22.45■■□□□ 1.18
SH3RF3Q8TEJ3 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
SH3RF3Q8TEJ3 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
SH3RF3Q8TEJ3 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SH3RF3Q8TEJ3 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC22.45■■□□□ 1.18
SH3RF3Q8TEJ3 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
SH3RF3Q8TEJ3 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC22.45■■□□□ 1.18
SH3RF3Q8TEJ3 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SH3RF3Q8TEJ3 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SH3RF3Q8TEJ3 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SH3RF3Q8TEJ3 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SH3RF3Q8TEJ3 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC22.44■■□□□ 1.18
SH3RF3Q8TEJ3 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC22.44■■□□□ 1.18
SH3RF3Q8TEJ3 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC22.44■■□□□ 1.18
SH3RF3Q8TEJ3 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC22.44■■□□□ 1.18
SH3RF3Q8TEJ3 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
SH3RF3Q8TEJ3 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SH3RF3Q8TEJ3 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC22.44■■□□□ 1.18
SH3RF3Q8TEJ3 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC22.44■■□□□ 1.18
SH3RF3Q8TEJ3 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SH3RF3Q8TEJ3 AL109659.2-201ENST00000606809 1674 ntBASIC22.44■■□□□ 1.18
SH3RF3Q8TEJ3 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC22.44■■□□□ 1.18
SH3RF3Q8TEJ3 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SH3RF3Q8TEJ3 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
SH3RF3Q8TEJ3 ADM-207ENST00000530439 1839 ntTSL 2 BASIC22.43■■□□□ 1.18
SH3RF3Q8TEJ3 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
SH3RF3Q8TEJ3 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
SH3RF3Q8TEJ3 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC22.43■■□□□ 1.18
SH3RF3Q8TEJ3 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
SH3RF3Q8TEJ3 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
SH3RF3Q8TEJ3 HBZP1-201ENST00000354915 429 ntBASIC22.43■■□□□ 1.18
SH3RF3Q8TEJ3 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC22.43■■□□□ 1.18
SH3RF3Q8TEJ3 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
SH3RF3Q8TEJ3 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
SH3RF3Q8TEJ3 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
SH3RF3Q8TEJ3 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC22.43■■□□□ 1.18
SH3RF3Q8TEJ3 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
SH3RF3Q8TEJ3 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC22.43■■□□□ 1.18
SH3RF3Q8TEJ3 KRT8P32-201ENST00000512863 1461 ntBASIC22.42■■□□□ 1.18
SH3RF3Q8TEJ3 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SH3RF3Q8TEJ3 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
SH3RF3Q8TEJ3 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC22.42■■□□□ 1.18
SH3RF3Q8TEJ3 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SH3RF3Q8TEJ3 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
SH3RF3Q8TEJ3 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC22.42■■□□□ 1.18
SH3RF3Q8TEJ3 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC22.42■■□□□ 1.18
SH3RF3Q8TEJ3 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC22.42■■□□□ 1.18
SH3RF3Q8TEJ3 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC22.42■■□□□ 1.18
SH3RF3Q8TEJ3 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC22.42■■□□□ 1.18
SH3RF3Q8TEJ3 METTL23-204ENST00000586752 904 ntTSL 2 BASIC22.42■■□□□ 1.18
SH3RF3Q8TEJ3 AC112497.1-201ENST00000624824 639 ntBASIC22.42■■□□□ 1.18
SH3RF3Q8TEJ3 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC22.42■■□□□ 1.18
SH3RF3Q8TEJ3 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SH3RF3Q8TEJ3 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SH3RF3Q8TEJ3 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SH3RF3Q8TEJ3 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
SH3RF3Q8TEJ3 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC22.42■■□□□ 1.18
SH3RF3Q8TEJ3 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
SH3RF3Q8TEJ3 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC22.42■■□□□ 1.18
SH3RF3Q8TEJ3 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SH3RF3Q8TEJ3 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SH3RF3Q8TEJ3 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC22.41■■□□□ 1.18
SH3RF3Q8TEJ3 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
SH3RF3Q8TEJ3 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SH3RF3Q8TEJ3 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC22.41■■□□□ 1.18
SH3RF3Q8TEJ3 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SH3RF3Q8TEJ3 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SH3RF3Q8TEJ3 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SH3RF3Q8TEJ3 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SH3RF3Q8TEJ3 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SH3RF3Q8TEJ3 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC22.41■■□□□ 1.18
SH3RF3Q8TEJ3 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC22.41■■□□□ 1.18
SH3RF3Q8TEJ3 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC22.41■■□□□ 1.18
SH3RF3Q8TEJ3 AC093458.2-201ENST00000623150 629 ntBASIC22.41■■□□□ 1.18
SH3RF3Q8TEJ3 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SH3RF3Q8TEJ3 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
SH3RF3Q8TEJ3 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
SH3RF3Q8TEJ3 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC22.41■■□□□ 1.18
SH3RF3Q8TEJ3 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SH3RF3Q8TEJ3 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SH3RF3Q8TEJ3 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SH3RF3Q8TEJ3 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SH3RF3Q8TEJ3 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC22.4■■□□□ 1.18
SH3RF3Q8TEJ3 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SH3RF3Q8TEJ3 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SH3RF3Q8TEJ3 ENSA-205ENST00000361532 792 ntTSL 2 BASIC22.4■■□□□ 1.18
SH3RF3Q8TEJ3 GRAMD4P1-201ENST00000435181 1110 ntBASIC22.4■■□□□ 1.18
SH3RF3Q8TEJ3 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC22.4■■□□□ 1.18
SH3RF3Q8TEJ3 AC034232.1-201ENST00000506026 1064 ntBASIC22.4■■□□□ 1.18
SH3RF3Q8TEJ3 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC22.4■■□□□ 1.18
SH3RF3Q8TEJ3 AC079602.3-201ENST00000623931 403 ntBASIC22.4■■□□□ 1.18
SH3RF3Q8TEJ3 AL157888.1-201ENST00000631930 593 ntBASIC22.4■■□□□ 1.18
SH3RF3Q8TEJ3 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SH3RF3Q8TEJ3 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC22.4■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms