Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CPEB3Q8NE35 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.54■□□□□ 0.24
CPEB3Q8NE35 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.54■□□□□ 0.24
CPEB3Q8NE35 TSPY15P-201ENST00000457163 923 ntBASIC16.54■□□□□ 0.24
CPEB3Q8NE35 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.54■□□□□ 0.24
CPEB3Q8NE35 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CPEB3Q8NE35 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CPEB3Q8NE35 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.54■□□□□ 0.24
CPEB3Q8NE35 AL355075.4-201ENST00000554988 638 ntBASIC16.54■□□□□ 0.24
CPEB3Q8NE35 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.54■□□□□ 0.24
CPEB3Q8NE35 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.54■□□□□ 0.24
CPEB3Q8NE35 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CPEB3Q8NE35 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CPEB3Q8NE35 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CPEB3Q8NE35 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CPEB3Q8NE35 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CPEB3Q8NE35 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CPEB3Q8NE35 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CPEB3Q8NE35 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CPEB3Q8NE35 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.53■□□□□ 0.24
CPEB3Q8NE35 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CPEB3Q8NE35 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CPEB3Q8NE35 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CPEB3Q8NE35 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
CPEB3Q8NE35 AC096733.2-201ENST00000609937 1394 ntBASIC16.53■□□□□ 0.24
CPEB3Q8NE35 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.53■□□□□ 0.24
CPEB3Q8NE35 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CPEB3Q8NE35 UNC93B2-201ENST00000285383 730 ntBASIC16.53■□□□□ 0.24
CPEB3Q8NE35 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CPEB3Q8NE35 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CPEB3Q8NE35 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CPEB3Q8NE35 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.53■□□□□ 0.24
CPEB3Q8NE35 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.53■□□□□ 0.24
CPEB3Q8NE35 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.53■□□□□ 0.24
CPEB3Q8NE35 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CPEB3Q8NE35 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.53■□□□□ 0.24
CPEB3Q8NE35 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
CPEB3Q8NE35 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.53■□□□□ 0.24
CPEB3Q8NE35 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
CPEB3Q8NE35 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.53■□□□□ 0.24
CPEB3Q8NE35 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CPEB3Q8NE35 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CPEB3Q8NE35 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.53■□□□□ 0.24
CPEB3Q8NE35 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CPEB3Q8NE35 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CPEB3Q8NE35 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.53■□□□□ 0.24
CPEB3Q8NE35 AC079598.2-202ENST00000546624 1451 ntBASIC16.53■□□□□ 0.24
CPEB3Q8NE35 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CPEB3Q8NE35 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.53■□□□□ 0.24
CPEB3Q8NE35 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
CPEB3Q8NE35 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.53■□□□□ 0.24
CPEB3Q8NE35 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.53■□□□□ 0.24
CPEB3Q8NE35 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.53■□□□□ 0.24
CPEB3Q8NE35 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CPEB3Q8NE35 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.52■□□□□ 0.24
CPEB3Q8NE35 AC006333.2-201ENST00000607957 2099 ntBASIC16.52■□□□□ 0.24
CPEB3Q8NE35 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
CPEB3Q8NE35 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CPEB3Q8NE35 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CPEB3Q8NE35 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CPEB3Q8NE35 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.52■□□□□ 0.24
CPEB3Q8NE35 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.52■□□□□ 0.24
CPEB3Q8NE35 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.52■□□□□ 0.24
CPEB3Q8NE35 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.52■□□□□ 0.24
CPEB3Q8NE35 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.52■□□□□ 0.24
CPEB3Q8NE35 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CPEB3Q8NE35 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CPEB3Q8NE35 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
CPEB3Q8NE35 CRYGFP-201ENST00000418459 633 ntBASIC16.52■□□□□ 0.24
CPEB3Q8NE35 MFAP1P1-201ENST00000442257 1255 ntBASIC16.52■□□□□ 0.24
CPEB3Q8NE35 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CPEB3Q8NE35 AP000525.1-201ENST00000608286 694 ntBASIC16.52■□□□□ 0.24
CPEB3Q8NE35 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
CPEB3Q8NE35 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.52■□□□□ 0.23
CPEB3Q8NE35 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
CPEB3Q8NE35 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CPEB3Q8NE35 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CPEB3Q8NE35 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CPEB3Q8NE35 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CPEB3Q8NE35 AC120498.9-201ENST00000339021 3867 ntBASIC16.51■□□□□ 0.23
CPEB3Q8NE35 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPEB3Q8NE35 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPEB3Q8NE35 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.51■□□□□ 0.23
CPEB3Q8NE35 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
CPEB3Q8NE35 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPEB3Q8NE35 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CPEB3Q8NE35 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPEB3Q8NE35 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CPEB3Q8NE35 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPEB3Q8NE35 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CPEB3Q8NE35 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPEB3Q8NE35 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPEB3Q8NE35 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPEB3Q8NE35 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPEB3Q8NE35 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.51■□□□□ 0.23
CPEB3Q8NE35 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.51■□□□□ 0.23
CPEB3Q8NE35 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.51■□□□□ 0.23
CPEB3Q8NE35 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.51■□□□□ 0.23
CPEB3Q8NE35 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.51■□□□□ 0.23
CPEB3Q8NE35 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms