Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHPFQ8IZ52 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.22■□□□□ 0.67
CHPFQ8IZ52 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHPFQ8IZ52 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.22■□□□□ 0.67
CHPFQ8IZ52 KRT18P56-201ENST00000507275 550 ntBASIC19.22■□□□□ 0.67
CHPFQ8IZ52 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CHPFQ8IZ52 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHPFQ8IZ52 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHPFQ8IZ52 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.22■□□□□ 0.67
CHPFQ8IZ52 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
CHPFQ8IZ52 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.22■□□□□ 0.67
CHPFQ8IZ52 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.22■□□□□ 0.67
CHPFQ8IZ52 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.22■□□□□ 0.67
CHPFQ8IZ52 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHPFQ8IZ52 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHPFQ8IZ52 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHPFQ8IZ52 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHPFQ8IZ52 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHPFQ8IZ52 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHPFQ8IZ52 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CHPFQ8IZ52 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
CHPFQ8IZ52 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHPFQ8IZ52 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.21■□□□□ 0.67
CHPFQ8IZ52 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHPFQ8IZ52 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHPFQ8IZ52 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHPFQ8IZ52 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHPFQ8IZ52 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHPFQ8IZ52 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.21■□□□□ 0.67
CHPFQ8IZ52 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.21■□□□□ 0.67
CHPFQ8IZ52 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.21■□□□□ 0.67
CHPFQ8IZ52 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.21■□□□□ 0.67
CHPFQ8IZ52 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.21■□□□□ 0.67
CHPFQ8IZ52 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHPFQ8IZ52 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
CHPFQ8IZ52 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHPFQ8IZ52 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.21■□□□□ 0.67
CHPFQ8IZ52 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHPFQ8IZ52 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHPFQ8IZ52 GPAT2P1-201ENST00000444924 1672 ntBASIC19.2■□□□□ 0.66
CHPFQ8IZ52 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.2■□□□□ 0.66
CHPFQ8IZ52 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHPFQ8IZ52 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHPFQ8IZ52 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHPFQ8IZ52 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.2■□□□□ 0.66
CHPFQ8IZ52 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHPFQ8IZ52 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.2■□□□□ 0.66
CHPFQ8IZ52 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHPFQ8IZ52 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHPFQ8IZ52 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHPFQ8IZ52 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.2■□□□□ 0.66
CHPFQ8IZ52 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHPFQ8IZ52 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.2■□□□□ 0.66
CHPFQ8IZ52 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHPFQ8IZ52 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.2■□□□□ 0.66
CHPFQ8IZ52 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.2■□□□□ 0.66
CHPFQ8IZ52 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHPFQ8IZ52 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHPFQ8IZ52 ZNF444P1-201ENST00000559497 298 ntBASIC19.2■□□□□ 0.66
CHPFQ8IZ52 AL136038.3-201ENST00000561909 1096 ntBASIC19.2■□□□□ 0.66
CHPFQ8IZ52 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.2■□□□□ 0.66
CHPFQ8IZ52 AC116407.4-201ENST00000623319 1061 ntBASIC19.2■□□□□ 0.66
CHPFQ8IZ52 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.2■□□□□ 0.66
CHPFQ8IZ52 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.2■□□□□ 0.66
CHPFQ8IZ52 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHPFQ8IZ52 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHPFQ8IZ52 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHPFQ8IZ52 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHPFQ8IZ52 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHPFQ8IZ52 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHPFQ8IZ52 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
CHPFQ8IZ52 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHPFQ8IZ52 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHPFQ8IZ52 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.2■□□□□ 0.66
CHPFQ8IZ52 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHPFQ8IZ52 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.19■□□□□ 0.66
CHPFQ8IZ52 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHPFQ8IZ52 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHPFQ8IZ52 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHPFQ8IZ52 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHPFQ8IZ52 LINC01311-201ENST00000565162 1445 ntBASIC19.19■□□□□ 0.66
CHPFQ8IZ52 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHPFQ8IZ52 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.19■□□□□ 0.66
CHPFQ8IZ52 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CHPFQ8IZ52 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHPFQ8IZ52 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CHPFQ8IZ52 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHPFQ8IZ52 SPDYE15P-201ENST00000424157 909 ntBASIC19.19■□□□□ 0.66
CHPFQ8IZ52 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHPFQ8IZ52 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.19■□□□□ 0.66
CHPFQ8IZ52 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.19■□□□□ 0.66
CHPFQ8IZ52 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CHPFQ8IZ52 AC083849.1-201ENST00000615227 514 ntBASIC19.19■□□□□ 0.66
CHPFQ8IZ52 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHPFQ8IZ52 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.19■□□□□ 0.66
CHPFQ8IZ52 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHPFQ8IZ52 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHPFQ8IZ52 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHPFQ8IZ52 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHPFQ8IZ52 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms