Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 AL355385.1-201ENST00000606123 409 ntBASIC11.66□□□□□ -0.54
VPS13BQ7Z7G8 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
VPS13BQ7Z7G8 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
VPS13BQ7Z7G8 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC11.66□□□□□ -0.54
VPS13BQ7Z7G8 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
VPS13BQ7Z7G8 TCF3P1-201ENST00000423021 1937 ntBASIC11.66□□□□□ -0.54
VPS13BQ7Z7G8 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
VPS13BQ7Z7G8 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
VPS13BQ7Z7G8 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
VPS13BQ7Z7G8 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
VPS13BQ7Z7G8 ZNF815P-204ENST00000434898 1737 ntBASIC11.66□□□□□ -0.54
VPS13BQ7Z7G8 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
VPS13BQ7Z7G8 LSM5-204ENST00000409909 740 ntTSL 2 BASIC11.66□□□□□ -0.54
VPS13BQ7Z7G8 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC11.66□□□□□ -0.54
VPS13BQ7Z7G8 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC11.66□□□□□ -0.54
VPS13BQ7Z7G8 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC11.66□□□□□ -0.54
VPS13BQ7Z7G8 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC11.66□□□□□ -0.54
VPS13BQ7Z7G8 AFG3L1P-217ENST00000557444 2447 ntBASIC11.66□□□□□ -0.54
VPS13BQ7Z7G8 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC11.66□□□□□ -0.54
VPS13BQ7Z7G8 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
VPS13BQ7Z7G8 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
VPS13BQ7Z7G8 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC11.66□□□□□ -0.54
VPS13BQ7Z7G8 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC11.66□□□□□ -0.54
VPS13BQ7Z7G8 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
VPS13BQ7Z7G8 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
VPS13BQ7Z7G8 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
VPS13BQ7Z7G8 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
VPS13BQ7Z7G8 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC11.65□□□□□ -0.54
VPS13BQ7Z7G8 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
VPS13BQ7Z7G8 BX842568.4-201ENST00000421222 227 ntBASIC11.65□□□□□ -0.54
VPS13BQ7Z7G8 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC11.65□□□□□ -0.54
VPS13BQ7Z7G8 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC11.65□□□□□ -0.54
VPS13BQ7Z7G8 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC11.65□□□□□ -0.54
VPS13BQ7Z7G8 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC11.65□□□□□ -0.54
VPS13BQ7Z7G8 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
VPS13BQ7Z7G8 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
VPS13BQ7Z7G8 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
VPS13BQ7Z7G8 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
VPS13BQ7Z7G8 TREX1-205ENST00000625293 1783 ntBASIC11.65□□□□□ -0.54
VPS13BQ7Z7G8 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
VPS13BQ7Z7G8 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
VPS13BQ7Z7G8 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
VPS13BQ7Z7G8 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC11.65□□□□□ -0.54
VPS13BQ7Z7G8 AC079776.4-201ENST00000511039 504 ntBASIC11.65□□□□□ -0.54
VPS13BQ7Z7G8 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC11.65□□□□□ -0.54
VPS13BQ7Z7G8 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC11.65□□□□□ -0.54
VPS13BQ7Z7G8 AC024243.1-201ENST00000609234 778 ntBASIC11.65□□□□□ -0.54
VPS13BQ7Z7G8 ABBA01031661.1-201ENST00000634362 1253 ntBASIC11.65□□□□□ -0.54
VPS13BQ7Z7G8 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC11.65□□□□□ -0.54
VPS13BQ7Z7G8 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC11.65□□□□□ -0.54
VPS13BQ7Z7G8 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC11.65□□□□□ -0.54
VPS13BQ7Z7G8 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
VPS13BQ7Z7G8 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
VPS13BQ7Z7G8 AC091607.1-201ENST00000490318 1060 ntBASIC11.65□□□□□ -0.54
VPS13BQ7Z7G8 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC11.65□□□□□ -0.54
VPS13BQ7Z7G8 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC11.65□□□□□ -0.54
VPS13BQ7Z7G8 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC11.65□□□□□ -0.54
VPS13BQ7Z7G8 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC11.65□□□□□ -0.54
VPS13BQ7Z7G8 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
VPS13BQ7Z7G8 LINC02084-201ENST00000606069 1096 ntBASIC11.65□□□□□ -0.54
VPS13BQ7Z7G8 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
VPS13BQ7Z7G8 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC11.65□□□□□ -0.54
VPS13BQ7Z7G8 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC11.65□□□□□ -0.54
VPS13BQ7Z7G8 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC11.65□□□□□ -0.55
VPS13BQ7Z7G8 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC11.65□□□□□ -0.55
VPS13BQ7Z7G8 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
VPS13BQ7Z7G8 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
VPS13BQ7Z7G8 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
VPS13BQ7Z7G8 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
VPS13BQ7Z7G8 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC11.64□□□□□ -0.55
VPS13BQ7Z7G8 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
VPS13BQ7Z7G8 TP73-202ENST00000354437 2140 ntTSL 5 BASIC11.64□□□□□ -0.55
VPS13BQ7Z7G8 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
VPS13BQ7Z7G8 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC11.64□□□□□ -0.55
VPS13BQ7Z7G8 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC11.64□□□□□ -0.55
VPS13BQ7Z7G8 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
VPS13BQ7Z7G8 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
VPS13BQ7Z7G8 KRT18P67-201ENST00000432816 1264 ntBASIC11.64□□□□□ -0.55
VPS13BQ7Z7G8 AC138894.3-201ENST00000603787 634 ntBASIC11.64□□□□□ -0.55
VPS13BQ7Z7G8 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
VPS13BQ7Z7G8 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
VPS13BQ7Z7G8 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC11.64□□□□□ -0.55
VPS13BQ7Z7G8 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
VPS13BQ7Z7G8 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
VPS13BQ7Z7G8 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC11.64□□□□□ -0.55
VPS13BQ7Z7G8 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
VPS13BQ7Z7G8 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC11.64□□□□□ -0.55
VPS13BQ7Z7G8 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
VPS13BQ7Z7G8 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
VPS13BQ7Z7G8 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
VPS13BQ7Z7G8 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
VPS13BQ7Z7G8 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC11.64□□□□□ -0.55
VPS13BQ7Z7G8 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC11.64□□□□□ -0.55
VPS13BQ7Z7G8 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
VPS13BQ7Z7G8 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC11.64□□□□□ -0.55
VPS13BQ7Z7G8 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
VPS13BQ7Z7G8 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
VPS13BQ7Z7G8 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
VPS13BQ7Z7G8 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
VPS13BQ7Z7G8 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC11.64□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms