Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.75■□□□□ 0.59
ZNF549Q6P9A3 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
ZNF549Q6P9A3 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF549Q6P9A3 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF549Q6P9A3 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF549Q6P9A3 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF549Q6P9A3 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF549Q6P9A3 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.75■□□□□ 0.59
ZNF549Q6P9A3 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF549Q6P9A3 B3GAT3P1-201ENST00000471720 806 ntBASIC18.75■□□□□ 0.59
ZNF549Q6P9A3 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF549Q6P9A3 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.75■□□□□ 0.59
ZNF549Q6P9A3 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.75■□□□□ 0.59
ZNF549Q6P9A3 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.75■□□□□ 0.59
ZNF549Q6P9A3 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF549Q6P9A3 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF549Q6P9A3 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
ZNF549Q6P9A3 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF549Q6P9A3 AC104581.1-202ENST00000635932 2618 ntBASIC18.75■□□□□ 0.59
ZNF549Q6P9A3 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.75■□□□□ 0.59
ZNF549Q6P9A3 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF549Q6P9A3 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.75■□□□□ 0.59
ZNF549Q6P9A3 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF549Q6P9A3 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF549Q6P9A3 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF549Q6P9A3 WIZP1-201ENST00000531444 2299 ntBASIC18.75■□□□□ 0.59
ZNF549Q6P9A3 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF549Q6P9A3 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF549Q6P9A3 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF549Q6P9A3 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF549Q6P9A3 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
ZNF549Q6P9A3 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF549Q6P9A3 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
ZNF549Q6P9A3 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.74■□□□□ 0.59
ZNF549Q6P9A3 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.74■□□□□ 0.59
ZNF549Q6P9A3 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.74■□□□□ 0.59
ZNF549Q6P9A3 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF549Q6P9A3 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF549Q6P9A3 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.74■□□□□ 0.59
ZNF549Q6P9A3 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF549Q6P9A3 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF549Q6P9A3 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.74■□□□□ 0.59
ZNF549Q6P9A3 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.74■□□□□ 0.59
ZNF549Q6P9A3 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.74■□□□□ 0.59
ZNF549Q6P9A3 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.74■□□□□ 0.59
ZNF549Q6P9A3 CD177P1-201ENST00000606252 935 ntBASIC18.74■□□□□ 0.59
ZNF549Q6P9A3 MIR6786-201ENST00000616843 113 ntBASIC18.74■□□□□ 0.59
ZNF549Q6P9A3 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF549Q6P9A3 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.74■□□□□ 0.59
ZNF549Q6P9A3 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF549Q6P9A3 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
ZNF549Q6P9A3 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.74■□□□□ 0.59
ZNF549Q6P9A3 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF549Q6P9A3 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF549Q6P9A3 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.74■□□□□ 0.59
ZNF549Q6P9A3 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.74■□□□□ 0.59
ZNF549Q6P9A3 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
ZNF549Q6P9A3 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.74■□□□□ 0.59
ZNF549Q6P9A3 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.73■□□□□ 0.59
ZNF549Q6P9A3 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.73■□□□□ 0.59
ZNF549Q6P9A3 NEFHP1-201ENST00000412845 2629 ntBASIC18.73■□□□□ 0.59
ZNF549Q6P9A3 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF549Q6P9A3 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF549Q6P9A3 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF549Q6P9A3 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
ZNF549Q6P9A3 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.73■□□□□ 0.59
ZNF549Q6P9A3 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF549Q6P9A3 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF549Q6P9A3 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF549Q6P9A3 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF549Q6P9A3 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF549Q6P9A3 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF549Q6P9A3 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.73■□□□□ 0.59
ZNF549Q6P9A3 UBE2SP1-201ENST00000450587 669 ntBASIC18.73■□□□□ 0.59
ZNF549Q6P9A3 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.73■□□□□ 0.59
ZNF549Q6P9A3 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF549Q6P9A3 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.73■□□□□ 0.59
ZNF549Q6P9A3 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
ZNF549Q6P9A3 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.73■□□□□ 0.59
ZNF549Q6P9A3 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
ZNF549Q6P9A3 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.73■□□□□ 0.59
ZNF549Q6P9A3 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.73■□□□□ 0.59
ZNF549Q6P9A3 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF549Q6P9A3 ANO7L1-203ENST00000602586 1720 ntBASIC18.73■□□□□ 0.59
ZNF549Q6P9A3 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.73■□□□□ 0.59
ZNF549Q6P9A3 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF549Q6P9A3 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF549Q6P9A3 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF549Q6P9A3 AL135905.2-201ENST00000584934 1404 ntBASIC18.73■□□□□ 0.59
ZNF549Q6P9A3 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF549Q6P9A3 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF549Q6P9A3 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF549Q6P9A3 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF549Q6P9A3 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF549Q6P9A3 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF549Q6P9A3 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF549Q6P9A3 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF549Q6P9A3 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF549Q6P9A3 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF549Q6P9A3 AC009113.1-201ENST00000570267 2443 ntBASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms