Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC12.7□□□□□ -0.38
VPS13DQ5THJ4 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VPS13DQ5THJ4 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
VPS13DQ5THJ4 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC12.7□□□□□ -0.38
VPS13DQ5THJ4 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VPS13DQ5THJ4 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
VPS13DQ5THJ4 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VPS13DQ5THJ4 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC12.7□□□□□ -0.38
VPS13DQ5THJ4 HMGN1P19-201ENST00000436976 333 ntBASIC12.7□□□□□ -0.38
VPS13DQ5THJ4 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC12.7□□□□□ -0.38
VPS13DQ5THJ4 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VPS13DQ5THJ4 AC138894.3-201ENST00000603787 634 ntBASIC12.7□□□□□ -0.38
VPS13DQ5THJ4 AL592071.1-201ENST00000611956 408 ntBASIC12.7□□□□□ -0.38
VPS13DQ5THJ4 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
VPS13DQ5THJ4 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VPS13DQ5THJ4 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
VPS13DQ5THJ4 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
VPS13DQ5THJ4 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC12.7□□□□□ -0.38
VPS13DQ5THJ4 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
VPS13DQ5THJ4 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC12.7□□□□□ -0.38
VPS13DQ5THJ4 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
VPS13DQ5THJ4 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VPS13DQ5THJ4 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC12.7□□□□□ -0.38
VPS13DQ5THJ4 UBC-206ENST00000538617 1303 ntTSL 5 BASIC12.7□□□□□ -0.38
VPS13DQ5THJ4 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
VPS13DQ5THJ4 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC12.7□□□□□ -0.38
VPS13DQ5THJ4 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
VPS13DQ5THJ4 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VPS13DQ5THJ4 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC12.7□□□□□ -0.38
VPS13DQ5THJ4 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VPS13DQ5THJ4 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VPS13DQ5THJ4 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC12.7□□□□□ -0.38
VPS13DQ5THJ4 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC12.7□□□□□ -0.38
VPS13DQ5THJ4 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
VPS13DQ5THJ4 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
VPS13DQ5THJ4 SAPCD2P3-201ENST00000455031 850 ntBASIC12.7□□□□□ -0.38
VPS13DQ5THJ4 CDV3-207ENST00000508481 661 ntTSL 3 BASIC12.7□□□□□ -0.38
VPS13DQ5THJ4 AF228730.7-201ENST00000641842 219 ntBASIC12.7□□□□□ -0.38
VPS13DQ5THJ4 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VPS13DQ5THJ4 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VPS13DQ5THJ4 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VPS13DQ5THJ4 HLA-A-201ENST00000376802 1334 ntBASIC12.7□□□□□ -0.38
VPS13DQ5THJ4 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
VPS13DQ5THJ4 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC12.69□□□□□ -0.38
VPS13DQ5THJ4 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
VPS13DQ5THJ4 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC12.69□□□□□ -0.38
VPS13DQ5THJ4 AC074051.2-201ENST00000565115 352 ntBASIC12.69□□□□□ -0.38
VPS13DQ5THJ4 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC12.69□□□□□ -0.38
VPS13DQ5THJ4 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC12.69□□□□□ -0.38
VPS13DQ5THJ4 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
VPS13DQ5THJ4 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
VPS13DQ5THJ4 MED17-221ENST00000639724 2317 ntTSL 5 BASIC12.69□□□□□ -0.38
VPS13DQ5THJ4 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
VPS13DQ5THJ4 PWWP2AP1-201ENST00000429776 2273 ntBASIC12.69□□□□□ -0.38
VPS13DQ5THJ4 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VPS13DQ5THJ4 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC12.69□□□□□ -0.38
VPS13DQ5THJ4 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC12.69□□□□□ -0.38
VPS13DQ5THJ4 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC12.69□□□□□ -0.38
VPS13DQ5THJ4 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC12.69□□□□□ -0.38
VPS13DQ5THJ4 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC12.69□□□□□ -0.38
VPS13DQ5THJ4 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VPS13DQ5THJ4 HOXB1-202ENST00000577092 1414 ntBASIC12.69□□□□□ -0.38
VPS13DQ5THJ4 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VPS13DQ5THJ4 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC12.69□□□□□ -0.38
VPS13DQ5THJ4 NSUN5P1-202ENST00000421140 1535 ntBASIC12.69□□□□□ -0.38
VPS13DQ5THJ4 NSUN5P2-203ENST00000457352 1529 ntBASIC12.69□□□□□ -0.38
VPS13DQ5THJ4 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC12.69□□□□□ -0.38
VPS13DQ5THJ4 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
VPS13DQ5THJ4 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC12.69□□□□□ -0.38
VPS13DQ5THJ4 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VPS13DQ5THJ4 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
VPS13DQ5THJ4 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
VPS13DQ5THJ4 BMF-207ENST00000559701 630 ntTSL 3 BASIC12.69□□□□□ -0.38
VPS13DQ5THJ4 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC12.69□□□□□ -0.38
VPS13DQ5THJ4 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC12.69□□□□□ -0.38
VPS13DQ5THJ4 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC12.69□□□□□ -0.38
VPS13DQ5THJ4 Z69720.1-201ENST00000601483 472 ntBASIC12.69□□□□□ -0.38
VPS13DQ5THJ4 AC120114.3-201ENST00000611923 658 ntBASIC12.69□□□□□ -0.38
VPS13DQ5THJ4 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VPS13DQ5THJ4 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
VPS13DQ5THJ4 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC12.69□□□□□ -0.38
VPS13DQ5THJ4 AC024563.2-201ENST00000603282 481 ntBASIC12.69□□□□□ -0.38
VPS13DQ5THJ4 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC12.68□□□□□ -0.38
VPS13DQ5THJ4 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC12.68□□□□□ -0.38
VPS13DQ5THJ4 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC12.68□□□□□ -0.38
VPS13DQ5THJ4 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VPS13DQ5THJ4 EMD-201ENST00000369835 966 ntTSL 3 BASIC12.68□□□□□ -0.38
VPS13DQ5THJ4 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VPS13DQ5THJ4 BX640515.1-201ENST00000617215 977 ntBASIC12.68□□□□□ -0.38
VPS13DQ5THJ4 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
VPS13DQ5THJ4 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
VPS13DQ5THJ4 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
VPS13DQ5THJ4 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VPS13DQ5THJ4 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
VPS13DQ5THJ4 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
VPS13DQ5THJ4 ABR-204ENST00000543210 1049 ntTSL 2 BASIC12.68□□□□□ -0.38
VPS13DQ5THJ4 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
VPS13DQ5THJ4 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC12.68□□□□□ -0.38
VPS13DQ5THJ4 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VPS13DQ5THJ4 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms