Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC20.2■□□□□ 0.82
CTC1Q2NKJ3 AP002383.4-201ENST00000442518 975 ntBASIC20.2■□□□□ 0.82
CTC1Q2NKJ3 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.2■□□□□ 0.82
CTC1Q2NKJ3 AC011498.5-201ENST00000592027 486 ntBASIC20.2■□□□□ 0.82
CTC1Q2NKJ3 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC20.2■□□□□ 0.82
CTC1Q2NKJ3 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTC1Q2NKJ3 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTC1Q2NKJ3 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTC1Q2NKJ3 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CTC1Q2NKJ3 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CTC1Q2NKJ3 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTC1Q2NKJ3 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.2■□□□□ 0.82
CTC1Q2NKJ3 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.2■□□□□ 0.82
CTC1Q2NKJ3 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC20.2■□□□□ 0.82
CTC1Q2NKJ3 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTC1Q2NKJ3 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTC1Q2NKJ3 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.19■□□□□ 0.82
CTC1Q2NKJ3 TCF3P1-201ENST00000423021 1937 ntBASIC20.19■□□□□ 0.82
CTC1Q2NKJ3 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTC1Q2NKJ3 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTC1Q2NKJ3 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTC1Q2NKJ3 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.19■□□□□ 0.82
CTC1Q2NKJ3 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.19■□□□□ 0.82
CTC1Q2NKJ3 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTC1Q2NKJ3 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTC1Q2NKJ3 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.19■□□□□ 0.82
CTC1Q2NKJ3 NUS1P1-201ENST00000446295 882 ntBASIC20.19■□□□□ 0.82
CTC1Q2NKJ3 AC092597.1-201ENST00000487352 616 ntBASIC20.19■□□□□ 0.82
CTC1Q2NKJ3 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC20.19■□□□□ 0.82
CTC1Q2NKJ3 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC20.19■□□□□ 0.82
CTC1Q2NKJ3 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTC1Q2NKJ3 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC20.19■□□□□ 0.82
CTC1Q2NKJ3 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.19■□□□□ 0.82
CTC1Q2NKJ3 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CTC1Q2NKJ3 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.19■□□□□ 0.82
CTC1Q2NKJ3 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTC1Q2NKJ3 AC125437.2-201ENST00000625180 2167 ntBASIC20.19■□□□□ 0.82
CTC1Q2NKJ3 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
CTC1Q2NKJ3 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.19■□□□□ 0.82
CTC1Q2NKJ3 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTC1Q2NKJ3 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTC1Q2NKJ3 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CTC1Q2NKJ3 KRT8P11-201ENST00000409686 1436 ntBASIC20.19■□□□□ 0.82
CTC1Q2NKJ3 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTC1Q2NKJ3 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTC1Q2NKJ3 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTC1Q2NKJ3 BX119927.1-201ENST00000636596 1552 ntBASIC20.18■□□□□ 0.82
CTC1Q2NKJ3 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTC1Q2NKJ3 PPIH-202ENST00000372549 327 ntTSL 3 BASIC20.18■□□□□ 0.82
CTC1Q2NKJ3 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CTC1Q2NKJ3 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CTC1Q2NKJ3 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC20.18■□□□□ 0.82
CTC1Q2NKJ3 RASA4DP-201ENST00000460726 1199 ntBASIC20.18■□□□□ 0.82
CTC1Q2NKJ3 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC20.18■□□□□ 0.82
CTC1Q2NKJ3 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC20.18■□□□□ 0.82
CTC1Q2NKJ3 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTC1Q2NKJ3 AL121672.3-201ENST00000608644 468 ntBASIC20.18■□□□□ 0.82
CTC1Q2NKJ3 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC20.18■□□□□ 0.82
CTC1Q2NKJ3 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTC1Q2NKJ3 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CTC1Q2NKJ3 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTC1Q2NKJ3 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTC1Q2NKJ3 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.17■□□□□ 0.82
CTC1Q2NKJ3 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTC1Q2NKJ3 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTC1Q2NKJ3 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC20.17■□□□□ 0.82
CTC1Q2NKJ3 BX276092.5-203ENST00000456199 560 ntBASIC20.17■□□□□ 0.82
CTC1Q2NKJ3 AC009078.2-202ENST00000463353 338 ntBASIC20.17■□□□□ 0.82
CTC1Q2NKJ3 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CTC1Q2NKJ3 MIR4674-201ENST00000582457 87 ntBASIC20.17■□□□□ 0.82
CTC1Q2NKJ3 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CTC1Q2NKJ3 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CTC1Q2NKJ3 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC20.17■□□□□ 0.82
CTC1Q2NKJ3 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC20.17■□□□□ 0.82
CTC1Q2NKJ3 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTC1Q2NKJ3 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.17■□□□□ 0.82
CTC1Q2NKJ3 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.17■□□□□ 0.82
CTC1Q2NKJ3 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTC1Q2NKJ3 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTC1Q2NKJ3 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.17■□□□□ 0.82
CTC1Q2NKJ3 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.17■□□□□ 0.82
CTC1Q2NKJ3 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTC1Q2NKJ3 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTC1Q2NKJ3 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CTC1Q2NKJ3 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTC1Q2NKJ3 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTC1Q2NKJ3 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
CTC1Q2NKJ3 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTC1Q2NKJ3 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.16■□□□□ 0.82
CTC1Q2NKJ3 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTC1Q2NKJ3 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTC1Q2NKJ3 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.16■□□□□ 0.82
CTC1Q2NKJ3 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
CTC1Q2NKJ3 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.16■□□□□ 0.82
CTC1Q2NKJ3 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.16■□□□□ 0.82
CTC1Q2NKJ3 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTC1Q2NKJ3 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTC1Q2NKJ3 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.16■□□□□ 0.82
CTC1Q2NKJ3 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC20.16■□□□□ 0.82
CTC1Q2NKJ3 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms