Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC33.27■■■□□ 2.92
HMGXB3Q12766 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC33.27■■■□□ 2.92
HMGXB3Q12766 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC33.27■■■□□ 2.92
HMGXB3Q12766 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC33.27■■■□□ 2.92
HMGXB3Q12766 PRKN-208ENST00000610470 531 ntTSL 2 BASIC33.27■■■□□ 2.92
HMGXB3Q12766 PRKN-209ENST00000612485 225 ntTSL 5 BASIC33.27■■■□□ 2.92
HMGXB3Q12766 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC33.27■■■□□ 2.92
HMGXB3Q12766 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC33.27■■■□□ 2.92
HMGXB3Q12766 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
HMGXB3Q12766 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC33.26■■■□□ 2.92
HMGXB3Q12766 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC33.26■■■□□ 2.92
HMGXB3Q12766 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC33.26■■■□□ 2.92
HMGXB3Q12766 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC33.26■■■□□ 2.92
HMGXB3Q12766 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC33.26■■■□□ 2.92
HMGXB3Q12766 EP400NL-214ENST00000641289 2402 ntBASIC33.26■■■□□ 2.92
HMGXB3Q12766 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC33.26■■■□□ 2.91
HMGXB3Q12766 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC33.26■■■□□ 2.91
HMGXB3Q12766 DET1-207ENST00000564406 2315 ntTSL 2 BASIC33.26■■■□□ 2.91
HMGXB3Q12766 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC33.26■■■□□ 2.91
HMGXB3Q12766 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
HMGXB3Q12766 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
HMGXB3Q12766 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC33.25■■■□□ 2.91
HMGXB3Q12766 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC33.25■■■□□ 2.91
HMGXB3Q12766 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC33.25■■■□□ 2.91
HMGXB3Q12766 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC33.25■■■□□ 2.91
HMGXB3Q12766 RPL13AP23-201ENST00000480739 586 ntBASIC33.25■■■□□ 2.91
HMGXB3Q12766 AC093909.1-201ENST00000504731 1122 ntBASIC33.25■■■□□ 2.91
HMGXB3Q12766 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC33.25■■■□□ 2.91
HMGXB3Q12766 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC33.25■■■□□ 2.91
HMGXB3Q12766 AC024563.2-201ENST00000603282 481 ntBASIC33.25■■■□□ 2.91
HMGXB3Q12766 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC33.25■■■□□ 2.91
HMGXB3Q12766 FAM215A-202ENST00000632077 792 ntBASIC33.25■■■□□ 2.91
HMGXB3Q12766 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC33.25■■■□□ 2.91
HMGXB3Q12766 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC33.25■■■□□ 2.91
HMGXB3Q12766 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC33.25■■■□□ 2.91
HMGXB3Q12766 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC33.24■■■□□ 2.91
HMGXB3Q12766 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC33.24■■■□□ 2.91
HMGXB3Q12766 AC022898.2-201ENST00000616822 1312 ntBASIC33.24■■■□□ 2.91
HMGXB3Q12766 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
HMGXB3Q12766 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC33.24■■■□□ 2.91
HMGXB3Q12766 AC096582.2-201ENST00000510860 516 ntBASIC33.24■■■□□ 2.91
HMGXB3Q12766 NAT14-202ENST00000587400 416 ntTSL 5 BASIC33.24■■■□□ 2.91
HMGXB3Q12766 AC140113.2-201ENST00000604370 208 ntBASIC33.24■■■□□ 2.91
HMGXB3Q12766 AL691403.2-201ENST00000618460 490 ntBASIC33.24■■■□□ 2.91
HMGXB3Q12766 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC33.24■■■□□ 2.91
HMGXB3Q12766 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
HMGXB3Q12766 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC33.24■■■□□ 2.91
HMGXB3Q12766 AC008556.1-201ENST00000610908 2040 ntBASIC33.24■■■□□ 2.91
HMGXB3Q12766 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
HMGXB3Q12766 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC33.24■■■□□ 2.91
HMGXB3Q12766 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC33.24■■■□□ 2.91
HMGXB3Q12766 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC33.23■■■□□ 2.91
HMGXB3Q12766 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC33.23■■■□□ 2.91
HMGXB3Q12766 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
HMGXB3Q12766 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC33.23■■■□□ 2.91
HMGXB3Q12766 SCARNA2-201ENST00000458748 420 ntBASIC33.23■■■□□ 2.91
HMGXB3Q12766 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC33.23■■■□□ 2.91
HMGXB3Q12766 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC33.23■■■□□ 2.91
HMGXB3Q12766 AL355877.3-201ENST00000622820 899 ntBASIC33.23■■■□□ 2.91
HMGXB3Q12766 AC055717.3-201ENST00000622967 595 ntBASIC33.23■■■□□ 2.91
HMGXB3Q12766 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC33.23■■■□□ 2.91
HMGXB3Q12766 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC33.23■■■□□ 2.91
HMGXB3Q12766 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC33.23■■■□□ 2.91
HMGXB3Q12766 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC33.23■■■□□ 2.91
HMGXB3Q12766 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC33.23■■■□□ 2.91
HMGXB3Q12766 AL353692.3-201ENST00000407031 1396 ntBASIC33.23■■■□□ 2.91
HMGXB3Q12766 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
HMGXB3Q12766 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
HMGXB3Q12766 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC33.23■■■□□ 2.91
HMGXB3Q12766 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
HMGXB3Q12766 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
HMGXB3Q12766 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC33.23■■■□□ 2.91
HMGXB3Q12766 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC33.22■■■□□ 2.91
HMGXB3Q12766 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC33.22■■■□□ 2.91
HMGXB3Q12766 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC33.22■■■□□ 2.91
HMGXB3Q12766 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC33.22■■■□□ 2.91
HMGXB3Q12766 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC33.22■■■□□ 2.91
HMGXB3Q12766 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC33.22■■■□□ 2.91
HMGXB3Q12766 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
HMGXB3Q12766 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC33.22■■■□□ 2.91
HMGXB3Q12766 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC33.22■■■□□ 2.91
HMGXB3Q12766 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC33.22■■■□□ 2.91
HMGXB3Q12766 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC33.22■■■□□ 2.91
HMGXB3Q12766 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC33.21■■■□□ 2.91
HMGXB3Q12766 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
HMGXB3Q12766 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC33.21■■■□□ 2.91
HMGXB3Q12766 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC33.21■■■□□ 2.91
HMGXB3Q12766 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
HMGXB3Q12766 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC33.21■■■□□ 2.91
HMGXB3Q12766 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC33.21■■■□□ 2.91
HMGXB3Q12766 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
HMGXB3Q12766 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC33.21■■■□□ 2.91
HMGXB3Q12766 MINOS1P3-201ENST00000457048 203 ntBASIC33.21■■■□□ 2.91
HMGXB3Q12766 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC33.21■■■□□ 2.91
HMGXB3Q12766 AC005336.2-201ENST00000593183 939 ntBASIC33.21■■■□□ 2.91
HMGXB3Q12766 AC026310.3-201ENST00000625186 2373 ntBASIC33.2■■■□□ 2.91
HMGXB3Q12766 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
HMGXB3Q12766 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
HMGXB3Q12766 AC098831.1-202ENST00000438821 336 ntBASIC33.2■■■□□ 2.91
HMGXB3Q12766 URGCP-206ENST00000446958 365 ntTSL 2 BASIC33.2■■■□□ 2.91
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms