Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GABREP78334 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
GABREP78334 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.95■□□□□ 0.46
GABREP78334 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
GABREP78334 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
GABREP78334 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
GABREP78334 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
GABREP78334 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
GABREP78334 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
GABREP78334 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.94■□□□□ 0.46
GABREP78334 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
GABREP78334 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
GABREP78334 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.94■□□□□ 0.46
GABREP78334 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.94■□□□□ 0.46
GABREP78334 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.94■□□□□ 0.46
GABREP78334 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
GABREP78334 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.94■□□□□ 0.46
GABREP78334 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
GABREP78334 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
GABREP78334 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.94■□□□□ 0.46
GABREP78334 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.94■□□□□ 0.46
GABREP78334 EMBP1-201ENST00000458200 901 ntBASIC17.94■□□□□ 0.46
GABREP78334 AC009078.2-202ENST00000463353 338 ntBASIC17.94■□□□□ 0.46
GABREP78334 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.94■□□□□ 0.46
GABREP78334 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.94■□□□□ 0.46
GABREP78334 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.94■□□□□ 0.46
GABREP78334 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.94■□□□□ 0.46
GABREP78334 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
GABREP78334 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
GABREP78334 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
GABREP78334 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.94■□□□□ 0.46
GABREP78334 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
GABREP78334 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
GABREP78334 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
GABREP78334 AC104417.2-201ENST00000562989 1793 ntBASIC17.94■□□□□ 0.46
GABREP78334 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
GABREP78334 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
GABREP78334 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.94■□□□□ 0.46
GABREP78334 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.94■□□□□ 0.46
GABREP78334 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.94■□□□□ 0.46
GABREP78334 SLC25A24-204ENST00000569674 2357 ntBASIC17.94■□□□□ 0.46
GABREP78334 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GABREP78334 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
GABREP78334 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
GABREP78334 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GABREP78334 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GABREP78334 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
GABREP78334 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
GABREP78334 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.93■□□□□ 0.46
GABREP78334 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
GABREP78334 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GABREP78334 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.93■□□□□ 0.46
GABREP78334 AL023284.2-201ENST00000405850 579 ntBASIC17.93■□□□□ 0.46
GABREP78334 TSPY22P-201ENST00000427496 604 ntBASIC17.93■□□□□ 0.46
GABREP78334 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
GABREP78334 MCCD1P1-208ENST00000445732 328 ntBASIC17.93■□□□□ 0.46
GABREP78334 LINC00265-3P-201ENST00000447588 903 ntBASIC17.93■□□□□ 0.46
GABREP78334 AP000867.3-201ENST00000524675 377 ntBASIC17.93■□□□□ 0.46
GABREP78334 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.93■□□□□ 0.46
GABREP78334 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.93■□□□□ 0.46
GABREP78334 MIR3180-5-201ENST00000583743 153 ntBASIC17.93■□□□□ 0.46
GABREP78334 LINC01711-201ENST00000598340 967 ntBASIC17.93■□□□□ 0.46
GABREP78334 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.93■□□□□ 0.46
GABREP78334 AL031008.1-201ENST00000619963 541 ntBASIC17.93■□□□□ 0.46
GABREP78334 AC079602.3-201ENST00000623931 403 ntBASIC17.93■□□□□ 0.46
GABREP78334 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GABREP78334 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
GABREP78334 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
GABREP78334 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GABREP78334 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GABREP78334 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.93■□□□□ 0.46
GABREP78334 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GABREP78334 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
GABREP78334 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
GABREP78334 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.92■□□□□ 0.46
GABREP78334 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
GABREP78334 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.92■□□□□ 0.46
GABREP78334 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
GABREP78334 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
GABREP78334 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
GABREP78334 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GABREP78334 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
GABREP78334 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.92■□□□□ 0.46
GABREP78334 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.92■□□□□ 0.46
GABREP78334 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.92■□□□□ 0.46
GABREP78334 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GABREP78334 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GABREP78334 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.92■□□□□ 0.46
GABREP78334 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.92■□□□□ 0.46
GABREP78334 AL022342.1-201ENST00000400363 863 ntBASIC17.92■□□□□ 0.46
GABREP78334 TSPY19P-201ENST00000418461 509 ntBASIC17.92■□□□□ 0.46
GABREP78334 TSPY18P-201ENST00000441642 509 ntBASIC17.92■□□□□ 0.46
GABREP78334 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.92■□□□□ 0.46
GABREP78334 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.92■□□□□ 0.46
GABREP78334 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.92■□□□□ 0.46
GABREP78334 AC091304.2-201ENST00000564639 760 ntBASIC17.92■□□□□ 0.46
GABREP78334 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
GABREP78334 AL136038.4-201ENST00000603606 1261 ntBASIC17.92■□□□□ 0.46
GABREP78334 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.92■□□□□ 0.46
GABREP78334 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms