Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HIST1H3AP68431 MME-217ENST00000616757 1315 ntTSL 5 BASIC16.51■□□□□ 0.23
HIST1H3AP68431 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HIST1H3AP68431 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
HIST1H3AP68431 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
HIST1H3AP68431 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HIST1H3AP68431 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HIST1H3AP68431 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HIST1H3AP68431 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HIST1H3AP68431 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
HIST1H3AP68431 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HIST1H3AP68431 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HIST1H3AP68431 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
HIST1H3AP68431 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.51■□□□□ 0.23
HIST1H3AP68431 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.51■□□□□ 0.23
HIST1H3AP68431 DGCR10-201ENST00000609839 495 ntBASIC16.51■□□□□ 0.23
HIST1H3AP68431 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HIST1H3AP68431 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HIST1H3AP68431 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HIST1H3AP68431 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.51■□□□□ 0.23
HIST1H3AP68431 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HIST1H3AP68431 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.51■□□□□ 0.23
HIST1H3AP68431 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HIST1H3AP68431 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HIST1H3AP68431 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.51■□□□□ 0.23
HIST1H3AP68431 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.51■□□□□ 0.23
HIST1H3AP68431 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
HIST1H3AP68431 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
HIST1H3AP68431 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HIST1H3AP68431 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HIST1H3AP68431 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HIST1H3AP68431 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HIST1H3AP68431 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HIST1H3AP68431 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
HIST1H3AP68431 AC096733.2-201ENST00000609937 1394 ntBASIC16.51■□□□□ 0.23
HIST1H3AP68431 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.51■□□□□ 0.23
HIST1H3AP68431 ANO7L1-203ENST00000602586 1720 ntBASIC16.5■□□□□ 0.23
HIST1H3AP68431 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HIST1H3AP68431 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HIST1H3AP68431 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HIST1H3AP68431 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC16.5■□□□□ 0.23
HIST1H3AP68431 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
HIST1H3AP68431 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.5■□□□□ 0.23
HIST1H3AP68431 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HIST1H3AP68431 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
HIST1H3AP68431 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.5■□□□□ 0.23
HIST1H3AP68431 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
HIST1H3AP68431 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HIST1H3AP68431 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
HIST1H3AP68431 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC16.5■□□□□ 0.23
HIST1H3AP68431 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HIST1H3AP68431 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC16.5■□□□□ 0.23
HIST1H3AP68431 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC16.5■□□□□ 0.23
HIST1H3AP68431 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.5■□□□□ 0.23
HIST1H3AP68431 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
HIST1H3AP68431 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.5■□□□□ 0.23
HIST1H3AP68431 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.5■□□□□ 0.23
HIST1H3AP68431 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HIST1H3AP68431 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HIST1H3AP68431 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HIST1H3AP68431 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HIST1H3AP68431 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HIST1H3AP68431 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HIST1H3AP68431 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HIST1H3AP68431 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HIST1H3AP68431 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HIST1H3AP68431 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
HIST1H3AP68431 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
HIST1H3AP68431 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HIST1H3AP68431 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HIST1H3AP68431 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.49■□□□□ 0.23
HIST1H3AP68431 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
HIST1H3AP68431 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.49■□□□□ 0.23
HIST1H3AP68431 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HIST1H3AP68431 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC16.49■□□□□ 0.23
HIST1H3AP68431 REXO2-216ENST00000544196 452 ntTSL 3 BASIC16.49■□□□□ 0.23
HIST1H3AP68431 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC16.49■□□□□ 0.23
HIST1H3AP68431 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.49■□□□□ 0.23
HIST1H3AP68431 Z99916.2-201ENST00000604037 246 ntBASIC16.49■□□□□ 0.23
HIST1H3AP68431 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
HIST1H3AP68431 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.49■□□□□ 0.23
HIST1H3AP68431 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HIST1H3AP68431 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
HIST1H3AP68431 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HIST1H3AP68431 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.49■□□□□ 0.23
HIST1H3AP68431 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.49■□□□□ 0.23
HIST1H3AP68431 MTMR9LP-203ENST00000426597 1545 ntBASIC16.49■□□□□ 0.23
HIST1H3AP68431 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.49■□□□□ 0.23
HIST1H3AP68431 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.49■□□□□ 0.23
HIST1H3AP68431 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
HIST1H3AP68431 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
HIST1H3AP68431 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HIST1H3AP68431 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
HIST1H3AP68431 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HIST1H3AP68431 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.48■□□□□ 0.23
HIST1H3AP68431 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
HIST1H3AP68431 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
HIST1H3AP68431 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.48■□□□□ 0.23
HIST1H3AP68431 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HIST1H3AP68431 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms