Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.88■□□□□ 0.77
CLCN4P51793 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CLCN4P51793 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLCN4P51793 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CLCN4P51793 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLCN4P51793 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CLCN4P51793 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLCN4P51793 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLCN4P51793 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CLCN4P51793 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLCN4P51793 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLCN4P51793 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
CLCN4P51793 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.88■□□□□ 0.77
CLCN4P51793 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLCN4P51793 AC112497.1-201ENST00000624824 639 ntBASIC19.88■□□□□ 0.77
CLCN4P51793 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.88■□□□□ 0.77
CLCN4P51793 AL157888.1-201ENST00000631930 593 ntBASIC19.88■□□□□ 0.77
CLCN4P51793 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CLCN4P51793 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLCN4P51793 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLCN4P51793 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLCN4P51793 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLCN4P51793 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLCN4P51793 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.87■□□□□ 0.77
CLCN4P51793 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLCN4P51793 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.87■□□□□ 0.77
CLCN4P51793 AC112907.3-201ENST00000577781 2400 ntBASIC19.87■□□□□ 0.77
CLCN4P51793 SLC25A24-204ENST00000569674 2357 ntBASIC19.87■□□□□ 0.77
CLCN4P51793 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLCN4P51793 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CLCN4P51793 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLCN4P51793 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLCN4P51793 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.87■□□□□ 0.77
CLCN4P51793 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLCN4P51793 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLCN4P51793 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLCN4P51793 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLCN4P51793 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC19.87■□□□□ 0.77
CLCN4P51793 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.87■□□□□ 0.77
CLCN4P51793 AC246785.2-201ENST00000432512 513 ntBASIC19.87■□□□□ 0.77
CLCN4P51793 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLCN4P51793 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.87■□□□□ 0.77
CLCN4P51793 KRT8P26-201ENST00000534154 1276 ntBASIC19.87■□□□□ 0.77
CLCN4P51793 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.87■□□□□ 0.77
CLCN4P51793 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.87■□□□□ 0.77
CLCN4P51793 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.87■□□□□ 0.77
CLCN4P51793 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLCN4P51793 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLCN4P51793 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLCN4P51793 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CLCN4P51793 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.86■□□□□ 0.77
CLCN4P51793 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLCN4P51793 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLCN4P51793 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.86■□□□□ 0.77
CLCN4P51793 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.86■□□□□ 0.77
CLCN4P51793 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.86■□□□□ 0.77
CLCN4P51793 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CLCN4P51793 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLCN4P51793 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLCN4P51793 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLCN4P51793 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.86■□□□□ 0.77
CLCN4P51793 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CLCN4P51793 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLCN4P51793 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.86■□□□□ 0.77
CLCN4P51793 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CLCN4P51793 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC19.86■□□□□ 0.77
CLCN4P51793 AP002414.4-201ENST00000589764 1148 ntBASIC19.86■□□□□ 0.77
CLCN4P51793 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLCN4P51793 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CLCN4P51793 AC093525.10-201ENST00000625130 1569 ntBASIC19.86■□□□□ 0.77
CLCN4P51793 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLCN4P51793 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CLCN4P51793 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLCN4P51793 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLCN4P51793 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CLCN4P51793 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLCN4P51793 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLCN4P51793 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.85■□□□□ 0.77
CLCN4P51793 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.85■□□□□ 0.77
CLCN4P51793 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLCN4P51793 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLCN4P51793 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLCN4P51793 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLCN4P51793 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLCN4P51793 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLCN4P51793 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLCN4P51793 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.85■□□□□ 0.77
CLCN4P51793 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.85■□□□□ 0.77
CLCN4P51793 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.85■□□□□ 0.77
CLCN4P51793 AC111152.3-201ENST00000569699 673 ntBASIC19.85■□□□□ 0.77
CLCN4P51793 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.85■□□□□ 0.77
CLCN4P51793 MIR3917-201ENST00000580971 93 ntBASIC19.85■□□□□ 0.77
CLCN4P51793 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.85■□□□□ 0.77
CLCN4P51793 AL136038.4-201ENST00000603606 1261 ntBASIC19.85■□□□□ 0.77
CLCN4P51793 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC19.85■□□□□ 0.77
CLCN4P51793 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.85■□□□□ 0.77
CLCN4P51793 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.85■□□□□ 0.77
CLCN4P51793 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
CLCN4P51793 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC19.85■□□□□ 0.77
CLCN4P51793 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms