Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PDE6CP51160 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.41■□□□□ 0.86
PDE6CP51160 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDE6CP51160 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDE6CP51160 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDE6CP51160 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDE6CP51160 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
PDE6CP51160 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.41■□□□□ 0.86
PDE6CP51160 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.41■□□□□ 0.86
PDE6CP51160 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PDE6CP51160 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PDE6CP51160 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.41■□□□□ 0.86
PDE6CP51160 AC012306.2-201ENST00000609350 630 ntBASIC20.41■□□□□ 0.86
PDE6CP51160 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PDE6CP51160 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PDE6CP51160 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.41■□□□□ 0.86
PDE6CP51160 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDE6CP51160 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PDE6CP51160 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PDE6CP51160 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.41■□□□□ 0.86
PDE6CP51160 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
PDE6CP51160 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.41■□□□□ 0.86
PDE6CP51160 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDE6CP51160 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PDE6CP51160 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDE6CP51160 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.41■□□□□ 0.86
PDE6CP51160 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDE6CP51160 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.41■□□□□ 0.86
PDE6CP51160 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PDE6CP51160 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDE6CP51160 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PDE6CP51160 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDE6CP51160 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDE6CP51160 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PDE6CP51160 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
PDE6CP51160 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDE6CP51160 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
PDE6CP51160 TSPY23P-201ENST00000440136 739 ntBASIC20.4■□□□□ 0.86
PDE6CP51160 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.4■□□□□ 0.86
PDE6CP51160 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDE6CP51160 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDE6CP51160 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.4■□□□□ 0.86
PDE6CP51160 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
PDE6CP51160 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PDE6CP51160 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.4■□□□□ 0.86
PDE6CP51160 DGCR10-201ENST00000609839 495 ntBASIC20.4■□□□□ 0.86
PDE6CP51160 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.4■□□□□ 0.86
PDE6CP51160 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDE6CP51160 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
PDE6CP51160 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.4■□□□□ 0.86
PDE6CP51160 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
PDE6CP51160 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PDE6CP51160 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PDE6CP51160 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
PDE6CP51160 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.39■□□□□ 0.86
PDE6CP51160 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
PDE6CP51160 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.39■□□□□ 0.86
PDE6CP51160 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PDE6CP51160 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
PDE6CP51160 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
PDE6CP51160 KRT8P41-201ENST00000533985 1514 ntBASIC20.39■□□□□ 0.85
PDE6CP51160 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PDE6CP51160 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
PDE6CP51160 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PDE6CP51160 Z85996.1-201ENST00000494644 937 ntBASIC20.39■□□□□ 0.85
PDE6CP51160 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.39■□□□□ 0.85
PDE6CP51160 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PDE6CP51160 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.39■□□□□ 0.85
PDE6CP51160 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.39■□□□□ 0.85
PDE6CP51160 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.39■□□□□ 0.85
PDE6CP51160 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
PDE6CP51160 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.39■□□□□ 0.85
PDE6CP51160 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
PDE6CP51160 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PDE6CP51160 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
PDE6CP51160 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PDE6CP51160 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.38■□□□□ 0.85
PDE6CP51160 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PDE6CP51160 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDE6CP51160 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDE6CP51160 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.38■□□□□ 0.85
PDE6CP51160 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PDE6CP51160 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDE6CP51160 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDE6CP51160 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.38■□□□□ 0.85
PDE6CP51160 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.38■□□□□ 0.85
PDE6CP51160 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.38■□□□□ 0.85
PDE6CP51160 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.38■□□□□ 0.85
PDE6CP51160 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PDE6CP51160 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PDE6CP51160 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.38■□□□□ 0.85
PDE6CP51160 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.38■□□□□ 0.85
PDE6CP51160 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.38■□□□□ 0.85
PDE6CP51160 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.38■□□□□ 0.85
PDE6CP51160 AP000525.1-201ENST00000608286 694 ntBASIC20.38■□□□□ 0.85
PDE6CP51160 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDE6CP51160 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.38■□□□□ 0.85
PDE6CP51160 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PDE6CP51160 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDE6CP51160 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms