Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TM4SF4P48230 MIR564-202ENST00000385049 94 ntBASIC21.58■■□□□ 1.05
TM4SF4P48230 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
TM4SF4P48230 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC21.58■■□□□ 1.05
TM4SF4P48230 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC21.58■■□□□ 1.05
TM4SF4P48230 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TM4SF4P48230 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC21.58■■□□□ 1.05
TM4SF4P48230 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC21.58■■□□□ 1.05
TM4SF4P48230 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TM4SF4P48230 AC008608.2-201ENST00000606089 416 ntBASIC21.58■■□□□ 1.05
TM4SF4P48230 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
TM4SF4P48230 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
TM4SF4P48230 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC21.58■■□□□ 1.05
TM4SF4P48230 FAM215A-202ENST00000632077 792 ntBASIC21.58■■□□□ 1.05
TM4SF4P48230 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
TM4SF4P48230 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
TM4SF4P48230 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
TM4SF4P48230 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
TM4SF4P48230 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC21.58■■□□□ 1.04
TM4SF4P48230 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.58■■□□□ 1.04
TM4SF4P48230 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
TM4SF4P48230 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC21.57■■□□□ 1.04
TM4SF4P48230 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TM4SF4P48230 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TM4SF4P48230 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
TM4SF4P48230 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TM4SF4P48230 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TM4SF4P48230 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
TM4SF4P48230 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.57■■□□□ 1.04
TM4SF4P48230 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TM4SF4P48230 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TM4SF4P48230 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC21.57■■□□□ 1.04
TM4SF4P48230 AC132008.2-207ENST00000454517 770 ntBASIC21.57■■□□□ 1.04
TM4SF4P48230 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.57■■□□□ 1.04
TM4SF4P48230 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.57■■□□□ 1.04
TM4SF4P48230 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC21.57■■□□□ 1.04
TM4SF4P48230 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC21.57■■□□□ 1.04
TM4SF4P48230 AC116407.3-201ENST00000623905 1129 ntBASIC21.57■■□□□ 1.04
TM4SF4P48230 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TM4SF4P48230 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TM4SF4P48230 AL353692.3-201ENST00000407031 1396 ntBASIC21.57■■□□□ 1.04
TM4SF4P48230 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TM4SF4P48230 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
TM4SF4P48230 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TM4SF4P48230 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TM4SF4P48230 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TM4SF4P48230 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC21.57■■□□□ 1.04
TM4SF4P48230 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC21.56■■□□□ 1.04
TM4SF4P48230 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC21.56■■□□□ 1.04
TM4SF4P48230 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
TM4SF4P48230 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TM4SF4P48230 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
TM4SF4P48230 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TM4SF4P48230 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TM4SF4P48230 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TM4SF4P48230 HES2-202ENST00000377836 507 ntTSL 2 BASIC21.56■■□□□ 1.04
TM4SF4P48230 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC21.56■■□□□ 1.04
TM4SF4P48230 UPF3AP3-201ENST00000420996 769 ntBASIC21.56■■□□□ 1.04
TM4SF4P48230 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC21.56■■□□□ 1.04
TM4SF4P48230 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC21.56■■□□□ 1.04
TM4SF4P48230 AC020907.5-201ENST00000624372 1936 ntBASIC21.56■■□□□ 1.04
TM4SF4P48230 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
TM4SF4P48230 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TM4SF4P48230 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
TM4SF4P48230 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TM4SF4P48230 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TM4SF4P48230 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC21.55■■□□□ 1.04
TM4SF4P48230 AC008556.1-201ENST00000610908 2040 ntBASIC21.55■■□□□ 1.04
TM4SF4P48230 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TM4SF4P48230 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TM4SF4P48230 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TM4SF4P48230 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC21.55■■□□□ 1.04
TM4SF4P48230 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC21.55■■□□□ 1.04
TM4SF4P48230 HNRNPA1P28-201ENST00000424481 961 ntBASIC21.55■■□□□ 1.04
TM4SF4P48230 SCARNA2-201ENST00000458748 420 ntBASIC21.55■■□□□ 1.04
TM4SF4P48230 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC21.55■■□□□ 1.04
TM4SF4P48230 AC027796.2-201ENST00000575326 344 ntBASIC21.55■■□□□ 1.04
TM4SF4P48230 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TM4SF4P48230 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC21.55■■□□□ 1.04
TM4SF4P48230 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
TM4SF4P48230 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TM4SF4P48230 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TM4SF4P48230 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
TM4SF4P48230 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TM4SF4P48230 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
TM4SF4P48230 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TM4SF4P48230 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC21.55■■□□□ 1.04
TM4SF4P48230 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC21.55■■□□□ 1.04
TM4SF4P48230 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TM4SF4P48230 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TM4SF4P48230 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TM4SF4P48230 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC21.54■■□□□ 1.04
TM4SF4P48230 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.54■■□□□ 1.04
TM4SF4P48230 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TM4SF4P48230 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TM4SF4P48230 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TM4SF4P48230 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TM4SF4P48230 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TM4SF4P48230 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
TM4SF4P48230 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms