Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP8P40818 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.57■□□□□ 0.88
USP8P40818 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
USP8P40818 ITM2C-210ENST00000620962 501 ntBASIC20.57■□□□□ 0.88
USP8P40818 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
USP8P40818 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP8P40818 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.57■□□□□ 0.88
USP8P40818 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.56■□□□□ 0.88
USP8P40818 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
USP8P40818 HTR7P1-201ENST00000538670 1336 ntBASIC20.56■□□□□ 0.88
USP8P40818 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP8P40818 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
USP8P40818 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP8P40818 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP8P40818 IRX1P1-201ENST00000438849 1838 ntBASIC20.56■□□□□ 0.88
USP8P40818 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
USP8P40818 AP002982.1-201ENST00000492365 877 ntBASIC20.56■□□□□ 0.88
USP8P40818 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.56■□□□□ 0.88
USP8P40818 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
USP8P40818 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
USP8P40818 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP8P40818 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.56■□□□□ 0.88
USP8P40818 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP8P40818 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
USP8P40818 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
USP8P40818 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP8P40818 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
USP8P40818 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.55■□□□□ 0.88
USP8P40818 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
USP8P40818 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
USP8P40818 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
USP8P40818 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
USP8P40818 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.55■□□□□ 0.88
USP8P40818 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
USP8P40818 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.55■□□□□ 0.88
USP8P40818 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP8P40818 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.55■□□□□ 0.88
USP8P40818 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP8P40818 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP8P40818 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
USP8P40818 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
USP8P40818 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.55■□□□□ 0.88
USP8P40818 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
USP8P40818 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.55■□□□□ 0.88
USP8P40818 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
USP8P40818 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.55■□□□□ 0.88
USP8P40818 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
USP8P40818 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.55■□□□□ 0.88
USP8P40818 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP8P40818 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.55■□□□□ 0.88
USP8P40818 AL359736.2-201ENST00000621992 437 ntBASIC20.55■□□□□ 0.88
USP8P40818 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP8P40818 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP8P40818 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP8P40818 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP8P40818 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
USP8P40818 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
USP8P40818 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
USP8P40818 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP8P40818 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP8P40818 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP8P40818 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP8P40818 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
USP8P40818 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.54■□□□□ 0.88
USP8P40818 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
USP8P40818 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
USP8P40818 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
USP8P40818 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
USP8P40818 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
USP8P40818 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
USP8P40818 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
USP8P40818 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.54■□□□□ 0.88
USP8P40818 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.54■□□□□ 0.88
USP8P40818 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.54■□□□□ 0.88
USP8P40818 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.54■□□□□ 0.88
USP8P40818 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
USP8P40818 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.54■□□□□ 0.88
USP8P40818 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
USP8P40818 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
USP8P40818 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.54■□□□□ 0.88
USP8P40818 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
USP8P40818 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
USP8P40818 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
USP8P40818 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
USP8P40818 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
USP8P40818 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
USP8P40818 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
USP8P40818 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
USP8P40818 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.54■□□□□ 0.88
USP8P40818 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
USP8P40818 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
USP8P40818 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
USP8P40818 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.53■□□□□ 0.88
USP8P40818 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
USP8P40818 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
USP8P40818 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP8P40818 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP8P40818 FP475955.4-201ENST00000623131 1990 ntBASIC20.53■□□□□ 0.88
USP8P40818 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP8P40818 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms