Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
PTPN3P26045 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.27■□□□□ 0.68
PTPN3P26045 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN3P26045 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN3P26045 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN3P26045 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
PTPN3P26045 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
PTPN3P26045 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN3P26045 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.27■□□□□ 0.68
PTPN3P26045 AC096733.2-201ENST00000609937 1394 ntBASIC19.27■□□□□ 0.68
PTPN3P26045 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.27■□□□□ 0.68
PTPN3P26045 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN3P26045 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.27■□□□□ 0.68
PTPN3P26045 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.27■□□□□ 0.68
PTPN3P26045 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN3P26045 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.27■□□□□ 0.67
PTPN3P26045 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PTPN3P26045 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PTPN3P26045 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PTPN3P26045 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PTPN3P26045 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN3P26045 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.26■□□□□ 0.67
PTPN3P26045 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN3P26045 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.26■□□□□ 0.67
PTPN3P26045 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
PTPN3P26045 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN3P26045 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN3P26045 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN3P26045 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN3P26045 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN3P26045 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
PTPN3P26045 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.26■□□□□ 0.67
PTPN3P26045 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.26■□□□□ 0.67
PTPN3P26045 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN3P26045 DGCR10-201ENST00000609839 495 ntBASIC19.26■□□□□ 0.67
PTPN3P26045 AC026471.5-201ENST00000615068 467 ntBASIC19.26■□□□□ 0.67
PTPN3P26045 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN3P26045 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN3P26045 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN3P26045 HEIH-201ENST00000623091 1652 ntBASIC19.26■□□□□ 0.67
PTPN3P26045 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PTPN3P26045 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
PTPN3P26045 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.26■□□□□ 0.67
PTPN3P26045 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN3P26045 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.25■□□□□ 0.67
PTPN3P26045 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PTPN3P26045 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.25■□□□□ 0.67
PTPN3P26045 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN3P26045 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN3P26045 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN3P26045 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN3P26045 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN3P26045 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN3P26045 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN3P26045 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PTPN3P26045 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.25■□□□□ 0.67
PTPN3P26045 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.25■□□□□ 0.67
PTPN3P26045 KRT8P32-201ENST00000512863 1461 ntBASIC19.25■□□□□ 0.67
PTPN3P26045 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN3P26045 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN3P26045 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.25■□□□□ 0.67
PTPN3P26045 AL355355.2-201ENST00000442321 338 ntBASIC19.25■□□□□ 0.67
PTPN3P26045 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.25■□□□□ 0.67
PTPN3P26045 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.25■□□□□ 0.67
PTPN3P26045 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.25■□□□□ 0.67
PTPN3P26045 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.25■□□□□ 0.67
PTPN3P26045 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.25■□□□□ 0.67
PTPN3P26045 AC068587.9-201ENST00000641814 219 ntBASIC19.25■□□□□ 0.67
PTPN3P26045 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.25■□□□□ 0.67
PTPN3P26045 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN3P26045 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.25■□□□□ 0.67
PTPN3P26045 ANO7L1-203ENST00000602586 1720 ntBASIC19.25■□□□□ 0.67
PTPN3P26045 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN3P26045 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.25■□□□□ 0.67
PTPN3P26045 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
PTPN3P26045 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN3P26045 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
PTPN3P26045 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.24■□□□□ 0.67
PTPN3P26045 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.24■□□□□ 0.67
PTPN3P26045 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.24■□□□□ 0.67
PTPN3P26045 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN3P26045 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
PTPN3P26045 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
PTPN3P26045 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN3P26045 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.24■□□□□ 0.67
PTPN3P26045 MIR718-201ENST00000390190 70 ntBASIC19.24■□□□□ 0.67
PTPN3P26045 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.24■□□□□ 0.67
PTPN3P26045 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN3P26045 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.24■□□□□ 0.67
PTPN3P26045 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.24■□□□□ 0.67
PTPN3P26045 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN3P26045 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.24■□□□□ 0.67
PTPN3P26045 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.24■□□□□ 0.67
PTPN3P26045 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.24■□□□□ 0.67
PTPN3P26045 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.24■□□□□ 0.67
PTPN3P26045 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
PTPN3P26045 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PTPN3P26045 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.24■□□□□ 0.67
PTPN3P26045 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.24■□□□□ 0.67
PTPN3P26045 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms