Protein–RNA interactions for Protein: P21953

BCKDHB, 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHBP21953 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
BCKDHBP21953 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BCKDHBP21953 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
BCKDHBP21953 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.66■□□□□ 0.58
BCKDHBP21953 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BCKDHBP21953 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
BCKDHBP21953 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BCKDHBP21953 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
BCKDHBP21953 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.65■□□□□ 0.58
BCKDHBP21953 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BCKDHBP21953 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BCKDHBP21953 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.65■□□□□ 0.58
BCKDHBP21953 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BCKDHBP21953 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.65■□□□□ 0.58
BCKDHBP21953 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.65■□□□□ 0.58
BCKDHBP21953 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
BCKDHBP21953 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
BCKDHBP21953 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.65■□□□□ 0.58
BCKDHBP21953 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BCKDHBP21953 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BCKDHBP21953 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.65■□□□□ 0.58
BCKDHBP21953 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.65■□□□□ 0.58
BCKDHBP21953 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.65■□□□□ 0.58
BCKDHBP21953 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
BCKDHBP21953 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.65■□□□□ 0.58
BCKDHBP21953 AC138894.3-201ENST00000603787 634 ntBASIC18.65■□□□□ 0.58
BCKDHBP21953 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
BCKDHBP21953 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.65■□□□□ 0.58
BCKDHBP21953 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
BCKDHBP21953 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
BCKDHBP21953 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BCKDHBP21953 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BCKDHBP21953 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.65■□□□□ 0.58
BCKDHBP21953 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
BCKDHBP21953 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.64■□□□□ 0.58
BCKDHBP21953 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
BCKDHBP21953 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
BCKDHBP21953 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
BCKDHBP21953 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
BCKDHBP21953 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BCKDHBP21953 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BCKDHBP21953 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BCKDHBP21953 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BCKDHBP21953 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
BCKDHBP21953 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
BCKDHBP21953 KRT18P23-201ENST00000435622 1283 ntBASIC18.64■□□□□ 0.57
BCKDHBP21953 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
BCKDHBP21953 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.64■□□□□ 0.57
BCKDHBP21953 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.64■□□□□ 0.57
BCKDHBP21953 AP002469.2-201ENST00000531724 424 ntBASIC18.64■□□□□ 0.57
BCKDHBP21953 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.64■□□□□ 0.57
BCKDHBP21953 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
BCKDHBP21953 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.64■□□□□ 0.57
BCKDHBP21953 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
BCKDHBP21953 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
BCKDHBP21953 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.64■□□□□ 0.57
BCKDHBP21953 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.64■□□□□ 0.57
BCKDHBP21953 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
BCKDHBP21953 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
BCKDHBP21953 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.64■□□□□ 0.57
BCKDHBP21953 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
BCKDHBP21953 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BCKDHBP21953 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BCKDHBP21953 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.63■□□□□ 0.57
BCKDHBP21953 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BCKDHBP21953 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BCKDHBP21953 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BCKDHBP21953 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BCKDHBP21953 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BCKDHBP21953 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.63■□□□□ 0.57
BCKDHBP21953 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BCKDHBP21953 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BCKDHBP21953 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BCKDHBP21953 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BCKDHBP21953 AC104819.1-201ENST00000504587 486 ntBASIC18.63■□□□□ 0.57
BCKDHBP21953 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
BCKDHBP21953 AC079776.4-201ENST00000511039 504 ntBASIC18.63■□□□□ 0.57
BCKDHBP21953 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.63■□□□□ 0.57
BCKDHBP21953 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
BCKDHBP21953 SLC25A6P4-201ENST00000586535 553 ntBASIC18.63■□□□□ 0.57
BCKDHBP21953 AC005332.3-201ENST00000589904 676 ntBASIC18.63■□□□□ 0.57
BCKDHBP21953 LINC01711-201ENST00000598340 967 ntBASIC18.63■□□□□ 0.57
BCKDHBP21953 AC010240.3-201ENST00000607688 395 ntBASIC18.63■□□□□ 0.57
BCKDHBP21953 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BCKDHBP21953 AC004263.2-201ENST00000617183 678 ntBASIC18.63■□□□□ 0.57
BCKDHBP21953 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
BCKDHBP21953 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.63■□□□□ 0.57
BCKDHBP21953 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
BCKDHBP21953 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.63■□□□□ 0.57
BCKDHBP21953 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BCKDHBP21953 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BCKDHBP21953 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
BCKDHBP21953 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BCKDHBP21953 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BCKDHBP21953 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
BCKDHBP21953 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.62■□□□□ 0.57
BCKDHBP21953 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.62■□□□□ 0.57
BCKDHBP21953 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.62■□□□□ 0.57
BCKDHBP21953 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BCKDHBP21953 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms