Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.99■□□□□ 0.63
VCLP18206 AC116562.2-201ENST00000507042 360 ntBASIC18.99■□□□□ 0.63
VCLP18206 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
VCLP18206 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.99■□□□□ 0.63
VCLP18206 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.99■□□□□ 0.63
VCLP18206 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
VCLP18206 MIR6786-201ENST00000616843 113 ntBASIC18.99■□□□□ 0.63
VCLP18206 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
VCLP18206 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VCLP18206 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.99■□□□□ 0.63
VCLP18206 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
VCLP18206 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
VCLP18206 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VCLP18206 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VCLP18206 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
VCLP18206 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VCLP18206 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VCLP18206 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VCLP18206 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VCLP18206 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
VCLP18206 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
VCLP18206 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.98■□□□□ 0.63
VCLP18206 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.98■□□□□ 0.63
VCLP18206 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.98■□□□□ 0.63
VCLP18206 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
VCLP18206 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.98■□□□□ 0.63
VCLP18206 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
VCLP18206 REXO1L10P-201ENST00000615707 1290 ntBASIC18.98■□□□□ 0.63
VCLP18206 REXO1L12P-201ENST00000622156 912 ntBASIC18.98■□□□□ 0.63
VCLP18206 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VCLP18206 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VCLP18206 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
VCLP18206 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VCLP18206 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VCLP18206 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
VCLP18206 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
VCLP18206 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.98■□□□□ 0.63
VCLP18206 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VCLP18206 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.97■□□□□ 0.63
VCLP18206 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VCLP18206 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VCLP18206 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VCLP18206 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
VCLP18206 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
VCLP18206 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
VCLP18206 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
VCLP18206 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
VCLP18206 AC004951.3-201ENST00000418645 1148 ntBASIC18.97■□□□□ 0.63
VCLP18206 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VCLP18206 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.97■□□□□ 0.63
VCLP18206 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.97■□□□□ 0.63
VCLP18206 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.97■□□□□ 0.63
VCLP18206 AL355075.4-201ENST00000554988 638 ntBASIC18.97■□□□□ 0.63
VCLP18206 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.97■□□□□ 0.63
VCLP18206 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.97■□□□□ 0.63
VCLP18206 DGCR10-201ENST00000609839 495 ntBASIC18.97■□□□□ 0.63
VCLP18206 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.97■□□□□ 0.63
VCLP18206 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VCLP18206 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
VCLP18206 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
VCLP18206 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VCLP18206 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
VCLP18206 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
VCLP18206 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
VCLP18206 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
VCLP18206 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VCLP18206 B3GAT3P1-201ENST00000471720 806 ntBASIC18.96■□□□□ 0.63
VCLP18206 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
VCLP18206 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.96■□□□□ 0.63
VCLP18206 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.96■□□□□ 0.63
VCLP18206 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.96■□□□□ 0.63
VCLP18206 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VCLP18206 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
VCLP18206 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
VCLP18206 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
VCLP18206 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VCLP18206 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
VCLP18206 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
VCLP18206 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VCLP18206 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.96■□□□□ 0.63
VCLP18206 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.96■□□□□ 0.63
VCLP18206 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.96■□□□□ 0.63
VCLP18206 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VCLP18206 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
VCLP18206 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
VCLP18206 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VCLP18206 RCC2P6-201ENST00000526625 1557 ntBASIC18.95■□□□□ 0.62
VCLP18206 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VCLP18206 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VCLP18206 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VCLP18206 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VCLP18206 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
VCLP18206 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.95■□□□□ 0.62
VCLP18206 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.95■□□□□ 0.62
VCLP18206 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.95■□□□□ 0.62
VCLP18206 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.95■□□□□ 0.62
VCLP18206 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.95■□□□□ 0.62
VCLP18206 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VCLP18206 AC011298.2-201ENST00000617989 482 ntBASIC18.95■□□□□ 0.62
VCLP18206 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms