Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC21.03■□□□□ 0.96
SMPD1P17405 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMPD1P17405 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMPD1P17405 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC21.03■□□□□ 0.96
SMPD1P17405 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC21.03■□□□□ 0.96
SMPD1P17405 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SMPD1P17405 AL845331.1-201ENST00000424978 1190 ntBASIC21.03■□□□□ 0.96
SMPD1P17405 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC21.03■□□□□ 0.96
SMPD1P17405 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC21.03■□□□□ 0.96
SMPD1P17405 AC104390.1-201ENST00000555663 520 ntBASIC21.03■□□□□ 0.96
SMPD1P17405 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
SMPD1P17405 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
SMPD1P17405 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC21.03■□□□□ 0.96
SMPD1P17405 IL11-204ENST00000590625 1028 ntTSL 2 BASIC21.03■□□□□ 0.96
SMPD1P17405 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC21.03■□□□□ 0.96
SMPD1P17405 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
SMPD1P17405 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.03■□□□□ 0.96
SMPD1P17405 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMPD1P17405 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC21.03■□□□□ 0.96
SMPD1P17405 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.03■□□□□ 0.96
SMPD1P17405 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMPD1P17405 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC21.02■□□□□ 0.96
SMPD1P17405 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SMPD1P17405 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMPD1P17405 LINC01521-201ENST00000504184 1943 ntBASIC21.02■□□□□ 0.96
SMPD1P17405 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC21.02■□□□□ 0.96
SMPD1P17405 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.02■□□□□ 0.96
SMPD1P17405 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMPD1P17405 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SMPD1P17405 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC21.02■□□□□ 0.96
SMPD1P17405 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC21.02■□□□□ 0.96
SMPD1P17405 AC010240.3-201ENST00000607688 395 ntBASIC21.02■□□□□ 0.96
SMPD1P17405 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMPD1P17405 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SMPD1P17405 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMPD1P17405 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMPD1P17405 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMPD1P17405 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
SMPD1P17405 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMPD1P17405 KRT18P1-202ENST00000452408 1331 ntBASIC21.02■□□□□ 0.95
SMPD1P17405 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SMPD1P17405 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMPD1P17405 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMPD1P17405 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMPD1P17405 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMPD1P17405 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMPD1P17405 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMPD1P17405 ENSA-205ENST00000361532 792 ntTSL 2 BASIC21.01■□□□□ 0.95
SMPD1P17405 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC21.01■□□□□ 0.95
SMPD1P17405 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC21.01■□□□□ 0.95
SMPD1P17405 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC21.01■□□□□ 0.95
SMPD1P17405 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SMPD1P17405 TBCB-205ENST00000585746 875 ntTSL 3 BASIC21.01■□□□□ 0.95
SMPD1P17405 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC21.01■□□□□ 0.95
SMPD1P17405 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SMPD1P17405 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMPD1P17405 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC21.01■□□□□ 0.95
SMPD1P17405 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
SMPD1P17405 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMPD1P17405 KRT8P7-201ENST00000533003 1432 ntBASIC21.01■□□□□ 0.95
SMPD1P17405 HOXB1-202ENST00000577092 1414 ntBASIC21.01■□□□□ 0.95
SMPD1P17405 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMPD1P17405 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
SMPD1P17405 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
SMPD1P17405 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMPD1P17405 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SMPD1P17405 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SMPD1P17405 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
SMPD1P17405 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
SMPD1P17405 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC21■□□□□ 0.95
SMPD1P17405 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21■□□□□ 0.95
SMPD1P17405 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC21■□□□□ 0.95
SMPD1P17405 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
SMPD1P17405 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SMPD1P17405 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SMPD1P17405 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SMPD1P17405 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
SMPD1P17405 MIR564-202ENST00000385049 94 ntBASIC21■□□□□ 0.95
SMPD1P17405 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC21■□□□□ 0.95
SMPD1P17405 ELP6-205ENST00000439305 880 ntTSL 2 BASIC21■□□□□ 0.95
SMPD1P17405 NUS1P1-201ENST00000446295 882 ntBASIC21■□□□□ 0.95
SMPD1P17405 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC21■□□□□ 0.95
SMPD1P17405 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC21■□□□□ 0.95
SMPD1P17405 AC111152.3-201ENST00000569699 673 ntBASIC21■□□□□ 0.95
SMPD1P17405 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC21■□□□□ 0.95
SMPD1P17405 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
SMPD1P17405 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SMPD1P17405 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC21■□□□□ 0.95
SMPD1P17405 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SMPD1P17405 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC21■□□□□ 0.95
SMPD1P17405 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC21■□□□□ 0.95
SMPD1P17405 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC21■□□□□ 0.95
SMPD1P17405 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.99■□□□□ 0.95
SMPD1P17405 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMPD1P17405 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMPD1P17405 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMPD1P17405 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SMPD1P17405 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SMPD1P17405 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
SMPD1P17405 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms