Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
UBCP0CG48 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
UBCP0CG48 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
UBCP0CG48 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
UBCP0CG48 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC16.58■□□□□ 0.24
UBCP0CG48 POM121L13P-201ENST00000422362 380 ntBASIC16.58■□□□□ 0.24
UBCP0CG48 UNC93B4-201ENST00000505679 747 ntBASIC16.58■□□□□ 0.24
UBCP0CG48 AL160286.2-201ENST00000567150 934 ntBASIC16.58■□□□□ 0.24
UBCP0CG48 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.58■□□□□ 0.24
UBCP0CG48 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
UBCP0CG48 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
UBCP0CG48 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC16.58■□□□□ 0.24
UBCP0CG48 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
UBCP0CG48 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
UBCP0CG48 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
UBCP0CG48 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
UBCP0CG48 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
UBCP0CG48 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
UBCP0CG48 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
UBCP0CG48 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.58■□□□□ 0.24
UBCP0CG48 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
UBCP0CG48 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
UBCP0CG48 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.58■□□□□ 0.24
UBCP0CG48 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
UBCP0CG48 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
UBCP0CG48 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
UBCP0CG48 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBCP0CG48 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBCP0CG48 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
UBCP0CG48 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
UBCP0CG48 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
UBCP0CG48 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBCP0CG48 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
UBCP0CG48 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBCP0CG48 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBCP0CG48 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
UBCP0CG48 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.57■□□□□ 0.24
UBCP0CG48 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.57■□□□□ 0.24
UBCP0CG48 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.57■□□□□ 0.24
UBCP0CG48 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBCP0CG48 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.57■□□□□ 0.24
UBCP0CG48 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC16.57■□□□□ 0.24
UBCP0CG48 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
UBCP0CG48 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBCP0CG48 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBCP0CG48 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
UBCP0CG48 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBCP0CG48 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC16.57■□□□□ 0.24
UBCP0CG48 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC16.57■□□□□ 0.24
UBCP0CG48 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
UBCP0CG48 C1QL1P1-201ENST00000568105 661 ntBASIC16.57■□□□□ 0.24
UBCP0CG48 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBCP0CG48 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
UBCP0CG48 AC004264.1-201ENST00000608354 794 ntBASIC16.57■□□□□ 0.24
UBCP0CG48 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.57■□□□□ 0.24
UBCP0CG48 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBCP0CG48 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.57■□□□□ 0.24
UBCP0CG48 AL390961.4-201ENST00000623958 2535 ntBASIC16.57■□□□□ 0.24
UBCP0CG48 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.57■□□□□ 0.24
UBCP0CG48 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBCP0CG48 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
UBCP0CG48 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.56■□□□□ 0.24
UBCP0CG48 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.56■□□□□ 0.24
UBCP0CG48 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.56■□□□□ 0.24
UBCP0CG48 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBCP0CG48 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
UBCP0CG48 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
UBCP0CG48 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.56■□□□□ 0.24
UBCP0CG48 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.56■□□□□ 0.24
UBCP0CG48 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBCP0CG48 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBCP0CG48 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
UBCP0CG48 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBCP0CG48 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBCP0CG48 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBCP0CG48 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBCP0CG48 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.56■□□□□ 0.24
UBCP0CG48 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
UBCP0CG48 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBCP0CG48 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC16.56■□□□□ 0.24
UBCP0CG48 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC16.56■□□□□ 0.24
UBCP0CG48 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC16.56■□□□□ 0.24
UBCP0CG48 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC16.56■□□□□ 0.24
UBCP0CG48 GXYLT1P5-201ENST00000614548 1189 ntBASIC16.56■□□□□ 0.24
UBCP0CG48 AL109923.1-201ENST00000618799 583 ntBASIC16.56■□□□□ 0.24
UBCP0CG48 GAMT-205ENST00000640762 751 ntTSL 5 BASIC16.56■□□□□ 0.24
UBCP0CG48 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBCP0CG48 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBCP0CG48 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.56■□□□□ 0.24
UBCP0CG48 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBCP0CG48 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
UBCP0CG48 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.56■□□□□ 0.24
UBCP0CG48 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
UBCP0CG48 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.56■□□□□ 0.24
UBCP0CG48 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.56■□□□□ 0.24
UBCP0CG48 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.56■□□□□ 0.24
UBCP0CG48 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBCP0CG48 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
UBCP0CG48 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBCP0CG48 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms