Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
THBS1P07996 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
THBS1P07996 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.4■□□□□ 0.38
THBS1P07996 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
THBS1P07996 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.4■□□□□ 0.38
THBS1P07996 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
THBS1P07996 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.4■□□□□ 0.38
THBS1P07996 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.4■□□□□ 0.38
THBS1P07996 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.4■□□□□ 0.38
THBS1P07996 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
THBS1P07996 AC090164.3-201ENST00000610780 2143 ntBASIC17.4■□□□□ 0.38
THBS1P07996 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
THBS1P07996 AC138932.1-201ENST00000534164 6830 ntBASIC17.4■□□□□ 0.38
THBS1P07996 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.4■□□□□ 0.38
THBS1P07996 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.4■□□□□ 0.38
THBS1P07996 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
THBS1P07996 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
THBS1P07996 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
THBS1P07996 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
THBS1P07996 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
THBS1P07996 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
THBS1P07996 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
THBS1P07996 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
THBS1P07996 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
THBS1P07996 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
THBS1P07996 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
THBS1P07996 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.39■□□□□ 0.37
THBS1P07996 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.39■□□□□ 0.37
THBS1P07996 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.39■□□□□ 0.37
THBS1P07996 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.39■□□□□ 0.37
THBS1P07996 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
THBS1P07996 AC011298.2-201ENST00000617989 482 ntBASIC17.39■□□□□ 0.37
THBS1P07996 CR392000.1-201ENST00000624770 1228 ntBASIC17.39■□□□□ 0.37
THBS1P07996 AC068587.9-201ENST00000641814 219 ntBASIC17.39■□□□□ 0.37
THBS1P07996 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
THBS1P07996 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
THBS1P07996 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
THBS1P07996 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
THBS1P07996 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
THBS1P07996 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
THBS1P07996 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.39■□□□□ 0.37
THBS1P07996 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
THBS1P07996 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.39■□□□□ 0.37
THBS1P07996 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
THBS1P07996 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
THBS1P07996 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
THBS1P07996 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
THBS1P07996 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
THBS1P07996 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
THBS1P07996 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
THBS1P07996 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
THBS1P07996 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
THBS1P07996 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.38■□□□□ 0.37
THBS1P07996 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.38■□□□□ 0.37
THBS1P07996 FAM197Y4-202ENST00000622692 608 ntBASIC17.38■□□□□ 0.37
THBS1P07996 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
THBS1P07996 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
THBS1P07996 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.38■□□□□ 0.37
THBS1P07996 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.38■□□□□ 0.37
THBS1P07996 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.38■□□□□ 0.37
THBS1P07996 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
THBS1P07996 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
THBS1P07996 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.38■□□□□ 0.37
THBS1P07996 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
THBS1P07996 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.38■□□□□ 0.37
THBS1P07996 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
THBS1P07996 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.38■□□□□ 0.37
THBS1P07996 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
THBS1P07996 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
THBS1P07996 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.38■□□□□ 0.37
THBS1P07996 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.38■□□□□ 0.37
THBS1P07996 AL135905.2-201ENST00000584934 1404 ntBASIC17.38■□□□□ 0.37
THBS1P07996 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
THBS1P07996 KRT8P32-201ENST00000512863 1461 ntBASIC17.37■□□□□ 0.37
THBS1P07996 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.37■□□□□ 0.37
THBS1P07996 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
THBS1P07996 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
THBS1P07996 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
THBS1P07996 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.37■□□□□ 0.37
THBS1P07996 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
THBS1P07996 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
THBS1P07996 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
THBS1P07996 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
THBS1P07996 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
THBS1P07996 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
THBS1P07996 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
THBS1P07996 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
THBS1P07996 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.37■□□□□ 0.37
THBS1P07996 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
THBS1P07996 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.37■□□□□ 0.37
THBS1P07996 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.37■□□□□ 0.37
THBS1P07996 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.37■□□□□ 0.37
THBS1P07996 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
THBS1P07996 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.37■□□□□ 0.37
THBS1P07996 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
THBS1P07996 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.37■□□□□ 0.37
THBS1P07996 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
THBS1P07996 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
THBS1P07996 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
THBS1P07996 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms