Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CAPN1P07384 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.6■□□□□ 0.57
CAPN1P07384 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CAPN1P07384 AP002982.1-201ENST00000492365 877 ntBASIC18.6■□□□□ 0.57
CAPN1P07384 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CAPN1P07384 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.6■□□□□ 0.57
CAPN1P07384 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.6■□□□□ 0.57
CAPN1P07384 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.6■□□□□ 0.57
CAPN1P07384 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.6■□□□□ 0.57
CAPN1P07384 AC133561.5-201ENST00000635547 218 ntBASIC18.6■□□□□ 0.57
CAPN1P07384 AC097493.4-201ENST00000641197 219 ntBASIC18.6■□□□□ 0.57
CAPN1P07384 FP475955.4-201ENST00000623131 1990 ntBASIC18.6■□□□□ 0.57
CAPN1P07384 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
CAPN1P07384 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CAPN1P07384 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
CAPN1P07384 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.6■□□□□ 0.57
CAPN1P07384 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.6■□□□□ 0.57
CAPN1P07384 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CAPN1P07384 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CAPN1P07384 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.59■□□□□ 0.57
CAPN1P07384 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CAPN1P07384 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CAPN1P07384 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.59■□□□□ 0.57
CAPN1P07384 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CAPN1P07384 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CAPN1P07384 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CAPN1P07384 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CAPN1P07384 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
CAPN1P07384 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CAPN1P07384 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CAPN1P07384 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CAPN1P07384 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CAPN1P07384 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CAPN1P07384 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CAPN1P07384 NIFKP9-201ENST00000419265 221 ntBASIC18.59■□□□□ 0.57
CAPN1P07384 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CAPN1P07384 FAM210CP-201ENST00000445714 574 ntBASIC18.59■□□□□ 0.57
CAPN1P07384 NUDT16P1-203ENST00000513809 620 ntBASIC18.59■□□□□ 0.57
CAPN1P07384 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CAPN1P07384 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
CAPN1P07384 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CAPN1P07384 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CAPN1P07384 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CAPN1P07384 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CAPN1P07384 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CAPN1P07384 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CAPN1P07384 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CAPN1P07384 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CAPN1P07384 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.59■□□□□ 0.57
CAPN1P07384 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CAPN1P07384 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CAPN1P07384 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CAPN1P07384 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CAPN1P07384 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CAPN1P07384 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CAPN1P07384 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
CAPN1P07384 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.58■□□□□ 0.57
CAPN1P07384 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CAPN1P07384 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CAPN1P07384 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CAPN1P07384 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.58■□□□□ 0.56
CAPN1P07384 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CAPN1P07384 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CAPN1P07384 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CAPN1P07384 REXO1L10P-201ENST00000615707 1290 ntBASIC18.58■□□□□ 0.56
CAPN1P07384 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.58■□□□□ 0.56
CAPN1P07384 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
CAPN1P07384 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
CAPN1P07384 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
CAPN1P07384 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.58■□□□□ 0.56
CAPN1P07384 AC020763.4-201ENST00000623414 4170 ntBASIC18.58■□□□□ 0.56
CAPN1P07384 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CAPN1P07384 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CAPN1P07384 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CAPN1P07384 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CAPN1P07384 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.57■□□□□ 0.56
CAPN1P07384 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CAPN1P07384 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.57■□□□□ 0.56
CAPN1P07384 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CAPN1P07384 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CAPN1P07384 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.57■□□□□ 0.56
CAPN1P07384 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.57■□□□□ 0.56
CAPN1P07384 KSR1P1-201ENST00000446298 240 ntBASIC18.57■□□□□ 0.56
CAPN1P07384 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.57■□□□□ 0.56
CAPN1P07384 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.57■□□□□ 0.56
CAPN1P07384 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CAPN1P07384 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CAPN1P07384 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CAPN1P07384 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CAPN1P07384 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CAPN1P07384 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.57■□□□□ 0.56
CAPN1P07384 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CAPN1P07384 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.57■□□□□ 0.56
CAPN1P07384 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CAPN1P07384 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CAPN1P07384 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.57■□□□□ 0.56
CAPN1P07384 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.57■□□□□ 0.56
CAPN1P07384 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CAPN1P07384 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CAPN1P07384 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms