Protein–RNA interactions for Protein: P05166

PCCB, Propionyl-CoA carboxylase beta chain, mitochondrial, humanhuman

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCCBP05166 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCCBP05166 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.72■□□□□ 0.59
PCCBP05166 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
PCCBP05166 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.72■□□□□ 0.59
PCCBP05166 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
PCCBP05166 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCCBP05166 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.72■□□□□ 0.59
PCCBP05166 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCCBP05166 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCCBP05166 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PCCBP05166 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCCBP05166 TSPY5P-201ENST00000426936 936 ntBASIC18.72■□□□□ 0.59
PCCBP05166 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCCBP05166 MCCD1P1-208ENST00000445732 328 ntBASIC18.72■□□□□ 0.59
PCCBP05166 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.72■□□□□ 0.59
PCCBP05166 AC063952.2-201ENST00000498792 1227 ntBASIC18.72■□□□□ 0.59
PCCBP05166 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.72■□□□□ 0.59
PCCBP05166 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PCCBP05166 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
PCCBP05166 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCCBP05166 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCCBP05166 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.72■□□□□ 0.59
PCCBP05166 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.72■□□□□ 0.59
PCCBP05166 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCCBP05166 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCCBP05166 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.72■□□□□ 0.59
PCCBP05166 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.72■□□□□ 0.59
PCCBP05166 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCCBP05166 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCCBP05166 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.72■□□□□ 0.59
PCCBP05166 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCCBP05166 FEM1AP3-201ENST00000403722 1741 ntBASIC18.71■□□□□ 0.59
PCCBP05166 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
PCCBP05166 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCCBP05166 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.71■□□□□ 0.59
PCCBP05166 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.71■□□□□ 0.59
PCCBP05166 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
PCCBP05166 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCCBP05166 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCCBP05166 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
PCCBP05166 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCCBP05166 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.71■□□□□ 0.59
PCCBP05166 AL441883.1-201ENST00000566170 1045 ntBASIC18.71■□□□□ 0.59
PCCBP05166 LINC01238-205ENST00000567549 1107 ntBASIC18.71■□□□□ 0.59
PCCBP05166 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCCBP05166 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.71■□□□□ 0.59
PCCBP05166 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCCBP05166 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.71■□□□□ 0.59
PCCBP05166 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCCBP05166 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCCBP05166 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.71■□□□□ 0.59
PCCBP05166 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCCBP05166 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.71■□□□□ 0.59
PCCBP05166 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.71■□□□□ 0.58
PCCBP05166 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCCBP05166 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
PCCBP05166 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCCBP05166 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
PCCBP05166 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.7■□□□□ 0.58
PCCBP05166 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.7■□□□□ 0.58
PCCBP05166 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.7■□□□□ 0.58
PCCBP05166 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.7■□□□□ 0.58
PCCBP05166 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
PCCBP05166 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.7■□□□□ 0.58
PCCBP05166 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCCBP05166 AL031432.5-201ENST00000641059 760 ntBASIC18.7■□□□□ 0.58
PCCBP05166 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCCBP05166 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PCCBP05166 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCCBP05166 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCCBP05166 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCCBP05166 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.7■□□□□ 0.58
PCCBP05166 FP475955.4-201ENST00000623131 1990 ntBASIC18.7■□□□□ 0.58
PCCBP05166 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCCBP05166 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.69■□□□□ 0.58
PCCBP05166 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCCBP05166 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.69■□□□□ 0.58
PCCBP05166 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCCBP05166 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.69■□□□□ 0.58
PCCBP05166 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCCBP05166 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCCBP05166 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCCBP05166 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCCBP05166 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCCBP05166 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCCBP05166 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.69■□□□□ 0.58
PCCBP05166 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.69■□□□□ 0.58
PCCBP05166 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.69■□□□□ 0.58
PCCBP05166 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCCBP05166 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCCBP05166 AP000523.1-201ENST00000398242 1049 ntBASIC18.69■□□□□ 0.58
PCCBP05166 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
PCCBP05166 AL359075.1-203ENST00000462729 1002 ntBASIC18.69■□□□□ 0.58
PCCBP05166 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.69■□□□□ 0.58
PCCBP05166 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.69■□□□□ 0.58
PCCBP05166 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
PCCBP05166 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.69■□□□□ 0.58
PCCBP05166 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PCCBP05166 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
PCCBP05166 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms