Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MT-ND3P03897 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MT-ND3P03897 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
MT-ND3P03897 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MT-ND3P03897 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.25■□□□□ 0.67
MT-ND3P03897 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.25■□□□□ 0.67
MT-ND3P03897 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MT-ND3P03897 AC005829.2-201ENST00000571422 1056 ntBASIC19.25■□□□□ 0.67
MT-ND3P03897 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
MT-ND3P03897 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.25■□□□□ 0.67
MT-ND3P03897 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.25■□□□□ 0.67
MT-ND3P03897 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MT-ND3P03897 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MT-ND3P03897 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MT-ND3P03897 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.25■□□□□ 0.67
MT-ND3P03897 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MT-ND3P03897 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
MT-ND3P03897 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
MT-ND3P03897 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.25■□□□□ 0.67
MT-ND3P03897 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MT-ND3P03897 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MT-ND3P03897 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MT-ND3P03897 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MT-ND3P03897 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MT-ND3P03897 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.24■□□□□ 0.67
MT-ND3P03897 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
MT-ND3P03897 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.24■□□□□ 0.67
MT-ND3P03897 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
MT-ND3P03897 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MT-ND3P03897 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
MT-ND3P03897 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MT-ND3P03897 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.24■□□□□ 0.67
MT-ND3P03897 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.24■□□□□ 0.67
MT-ND3P03897 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.24■□□□□ 0.67
MT-ND3P03897 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.24■□□□□ 0.67
MT-ND3P03897 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MT-ND3P03897 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.24■□□□□ 0.67
MT-ND3P03897 AC005332.8-201ENST00000622750 2735 ntBASIC19.24■□□□□ 0.67
MT-ND3P03897 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MT-ND3P03897 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.24■□□□□ 0.67
MT-ND3P03897 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MT-ND3P03897 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MT-ND3P03897 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.24■□□□□ 0.67
MT-ND3P03897 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MT-ND3P03897 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.24■□□□□ 0.67
MT-ND3P03897 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.24■□□□□ 0.67
MT-ND3P03897 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.24■□□□□ 0.67
MT-ND3P03897 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MT-ND3P03897 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
MT-ND3P03897 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
MT-ND3P03897 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
MT-ND3P03897 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
MT-ND3P03897 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MT-ND3P03897 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
MT-ND3P03897 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.23■□□□□ 0.67
MT-ND3P03897 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MT-ND3P03897 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
MT-ND3P03897 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MT-ND3P03897 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MT-ND3P03897 AL596275.1-201ENST00000423464 877 ntBASIC19.23■□□□□ 0.67
MT-ND3P03897 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.23■□□□□ 0.67
MT-ND3P03897 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
MT-ND3P03897 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.23■□□□□ 0.67
MT-ND3P03897 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.23■□□□□ 0.67
MT-ND3P03897 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
MT-ND3P03897 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.23■□□□□ 0.67
MT-ND3P03897 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
MT-ND3P03897 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.23■□□□□ 0.67
MT-ND3P03897 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
MT-ND3P03897 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.23■□□□□ 0.67
MT-ND3P03897 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.23■□□□□ 0.67
MT-ND3P03897 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
MT-ND3P03897 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
MT-ND3P03897 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
MT-ND3P03897 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MT-ND3P03897 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MT-ND3P03897 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MT-ND3P03897 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MT-ND3P03897 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
MT-ND3P03897 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.22■□□□□ 0.67
MT-ND3P03897 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.22■□□□□ 0.67
MT-ND3P03897 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.22■□□□□ 0.67
MT-ND3P03897 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.22■□□□□ 0.67
MT-ND3P03897 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.22■□□□□ 0.67
MT-ND3P03897 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.22■□□□□ 0.67
MT-ND3P03897 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MT-ND3P03897 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MT-ND3P03897 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.22■□□□□ 0.67
MT-ND3P03897 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
MT-ND3P03897 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MT-ND3P03897 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
MT-ND3P03897 BICD1-207ENST00000551848 1962 ntBASIC19.22■□□□□ 0.67
MT-ND3P03897 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.22■□□□□ 0.67
MT-ND3P03897 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
MT-ND3P03897 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
MT-ND3P03897 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC19.22■□□□□ 0.67
MT-ND3P03897 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
MT-ND3P03897 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
MT-ND3P03897 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MT-ND3P03897 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms