Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
COL1A1P02452 FP475955.4-201ENST00000623131 1990 ntBASIC22.77■■□□□ 1.24
COL1A1P02452 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC22.77■■□□□ 1.24
COL1A1P02452 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
COL1A1P02452 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC22.77■■□□□ 1.24
COL1A1P02452 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC22.77■■□□□ 1.24
COL1A1P02452 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
COL1A1P02452 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC22.77■■□□□ 1.24
COL1A1P02452 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
COL1A1P02452 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
COL1A1P02452 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
COL1A1P02452 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC22.77■■□□□ 1.24
COL1A1P02452 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC22.77■■□□□ 1.24
COL1A1P02452 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.23
COL1A1P02452 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.23
COL1A1P02452 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
COL1A1P02452 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
COL1A1P02452 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
COL1A1P02452 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
COL1A1P02452 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC22.76■■□□□ 1.23
COL1A1P02452 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
COL1A1P02452 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
COL1A1P02452 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
COL1A1P02452 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC22.76■■□□□ 1.23
COL1A1P02452 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
COL1A1P02452 AL645929.1-201ENST00000420084 975 ntBASIC22.76■■□□□ 1.23
COL1A1P02452 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC22.76■■□□□ 1.23
COL1A1P02452 AL157888.1-201ENST00000631930 593 ntBASIC22.76■■□□□ 1.23
COL1A1P02452 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
COL1A1P02452 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
COL1A1P02452 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
COL1A1P02452 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC22.76■■□□□ 1.23
COL1A1P02452 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC22.76■■□□□ 1.23
COL1A1P02452 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
COL1A1P02452 AL032819.2-201ENST00000624543 2162 ntBASIC22.76■■□□□ 1.23
COL1A1P02452 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC22.76■■□□□ 1.23
COL1A1P02452 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
COL1A1P02452 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
COL1A1P02452 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC22.75■■□□□ 1.23
COL1A1P02452 KRT8P32-201ENST00000512863 1461 ntBASIC22.75■■□□□ 1.23
COL1A1P02452 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
COL1A1P02452 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
COL1A1P02452 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
COL1A1P02452 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC22.75■■□□□ 1.23
COL1A1P02452 ELP6-205ENST00000439305 880 ntTSL 2 BASIC22.75■■□□□ 1.23
COL1A1P02452 WDR6-223ENST00000627177 207 ntTSL 2 BASIC22.75■■□□□ 1.23
COL1A1P02452 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
COL1A1P02452 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
COL1A1P02452 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
COL1A1P02452 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
COL1A1P02452 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
COL1A1P02452 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
COL1A1P02452 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
COL1A1P02452 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC22.74■■□□□ 1.23
COL1A1P02452 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
COL1A1P02452 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC22.74■■□□□ 1.23
COL1A1P02452 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC22.74■■□□□ 1.23
COL1A1P02452 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC22.74■■□□□ 1.23
COL1A1P02452 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC22.74■■□□□ 1.23
COL1A1P02452 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC22.74■■□□□ 1.23
COL1A1P02452 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
COL1A1P02452 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC22.74■■□□□ 1.23
COL1A1P02452 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
COL1A1P02452 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
COL1A1P02452 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC22.74■■□□□ 1.23
COL1A1P02452 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
COL1A1P02452 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC22.74■■□□□ 1.23
COL1A1P02452 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
COL1A1P02452 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC22.74■■□□□ 1.23
COL1A1P02452 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
COL1A1P02452 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC22.74■■□□□ 1.23
COL1A1P02452 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
COL1A1P02452 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
COL1A1P02452 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC22.74■■□□□ 1.23
COL1A1P02452 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
COL1A1P02452 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
COL1A1P02452 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
COL1A1P02452 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
COL1A1P02452 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
COL1A1P02452 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
COL1A1P02452 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC22.73■■□□□ 1.23
COL1A1P02452 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC22.73■■□□□ 1.23
COL1A1P02452 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC22.73■■□□□ 1.23
COL1A1P02452 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
COL1A1P02452 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
COL1A1P02452 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
COL1A1P02452 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
COL1A1P02452 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
COL1A1P02452 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC22.73■■□□□ 1.23
COL1A1P02452 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
COL1A1P02452 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
COL1A1P02452 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC22.73■■□□□ 1.23
COL1A1P02452 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
COL1A1P02452 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
COL1A1P02452 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
COL1A1P02452 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
COL1A1P02452 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC22.73■■□□□ 1.23
COL1A1P02452 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
COL1A1P02452 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC22.73■■□□□ 1.23
COL1A1P02452 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC22.73■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms