Protein–RNA interactions for Protein: O75940

SMNDC1, Survival of motor neuron-related-splicing factor 30, humanhuman

Known RBP eCLIP

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1O75940 ACSM3-203ENST00000501740 839 ntTSL 512.72□□□□□ -0.373e-7■□□□□ 10.4
SMNDC1O75940 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC12.49□□□□□ -0.416e-20■□□□□ 10.4
SMNDC1O75940 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC12.49□□□□□ -0.416e-20■□□□□ 10.4
SMNDC1O75940 PDCD5-201ENST00000221784 558 ntTSL 312.47□□□□□ -0.416e-20■□□□□ 10.4
SMNDC1O75940 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC12.45□□□□□ -0.429e-27■□□□□ 10.4
SMNDC1O75940 AIMP2-201ENST00000223029 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.429e-27■□□□□ 10.4
SMNDC1O75940 ESYT1-201ENST00000267113 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.461e-7■□□□□ 10.4
SMNDC1O75940 FANCL-206ENST00000427708 864 ntTSL 511.59□□□□□ -0.553e-7■□□□□ 10.4
SMNDC1O75940 ARID1A-217ENST00000637788 3046 nt11.52□□□□□ -0.573e-7■□□□□ 10.4
SMNDC1O75940 NCAPG-205ENST00000514176 3017 ntTSL 1 (best)11.24□□□□□ -0.611e-9■□□□□ 10.4
SMNDC1O75940 TMEM63A-201ENST00000366835 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.625e-9■□□□□ 10.4
SMNDC1O75940 ACSM3-213ENST00000568235 558 ntTSL 411□□□□□ -0.653e-7■□□□□ 10.4
SMNDC1O75940 FANCL-205ENST00000417361 545 ntTSL 310.98□□□□□ -0.653e-7■□□□□ 10.4
SMNDC1O75940 ACSM3-205ENST00000561584 561 ntTSL 410.63□□□□□ -0.713e-7■□□□□ 10.4
SMNDC1O75940 AIMP2-203ENST00000400479 1107 ntTSL 5 BASIC10.49□□□□□ -0.739e-27■□□□□ 10.4
SMNDC1O75940 HSPB11-204ENST00000371378 894 ntTSL 3 BASIC10.46□□□□□ -0.733e-7■□□□□ 10.4
SMNDC1O75940 NCAPG-203ENST00000510063 807 ntTSL 510.41□□□□□ -0.741e-9■□□□□ 10.4
SMNDC1O75940 TMEM63A-205ENST00000483779 634 ntTSL 210.3□□□□□ -0.765e-9■□□□□ 10.4
SMNDC1O75940 FANCL-208ENST00000449070 964 ntTSL 1 (best)9.98□□□□□ -0.813e-7■□□□□ 10.4
SMNDC1O75940 CCT2-205ENST00000546859 595 ntTSL 29.64□□□□□ -0.873e-7■□□□□ 10.4
SMNDC1O75940 FANCL-207ENST00000446381 487 ntTSL 59.37□□□□□ -0.913e-7■□□□□ 10.4
SMNDC1O75940 CCT2-209ENST00000550455 481 ntTSL 29.31□□□□□ -0.923e-7■□□□□ 10.4
SMNDC1O75940 CCT2-210ENST00000550638 683 ntTSL 29.31□□□□□ -0.923e-7■□□□□ 10.4
SMNDC1O75940 CCT2-212ENST00000551620 776 ntTSL 29.31□□□□□ -0.923e-7■□□□□ 10.4
SMNDC1O75940 FASN-203ENST00000579410 424 ntTSL 29.2□□□□□ -0.942e-10■□□□□ 10.4
SMNDC1O75940 HSPB11-203ENST00000371377 760 ntTSL 1 (best) BASIC8.93□□□□□ -0.983e-7■□□□□ 10.4
SMNDC1O75940 AC004381.2-201ENST00000637768 1329 ntBASIC8.8□□□□□ -13e-7■□□□□ 10.4
SMNDC1O75940 CCT2-203ENST00000544368 1728 ntTSL 5 BASIC8.71□□□□□ -1.013e-7■□□□□ 10.4
SMNDC1O75940 FANCL-201ENST00000233741 1683 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.023e-7■□□□□ 10.4
SMNDC1O75940 FANCL-202ENST00000402135 1698 ntAPPRIS ALT1 TSL 2 BASIC8.65□□□□□ -1.023e-7■□□□□ 10.4
SMNDC1O75940 FANCL-204ENST00000403676 849 ntTSL 3 BASIC8.07□□□□□ -1.123e-7■□□□□ 10.4
SMNDC1O75940 HSPB11-206ENST00000489675 879 ntTSL 27.66□□□□□ -1.183e-7■□□□□ 10.4
SMNDC1O75940 CCT2-208ENST00000550010 1754 ntTSL 57.56□□□□□ -1.23e-7■□□□□ 10.4
SMNDC1O75940 FANCL-203ENST00000403295 1576 ntTSL 1 (best) BASIC7.14□□□□□ -1.273e-7■□□□□ 10.4
SMNDC1O75940 PDCD5-205ENST00000586316 480 ntTSL 26.83□□□□□ -1.326e-20■□□□□ 10.4
SMNDC1O75940 FANCL-210ENST00000481670 522 ntTSL 36.68□□□□□ -1.343e-7■□□□□ 10.4
SMNDC1O75940 PDCD5-206ENST00000588622 458 ntTSL 26.25□□□□□ -1.416e-20■□□□□ 10.4
SMNDC1O75940 OPA1-213ENST00000475899 685 ntTSL 35.61□□□□□ -1.513e-7■□□□□ 10.4
SMNDC1O75940 SNORA80D-201ENST00000384488 135 ntBASIC1.74□□□□□ -2.139e-27■□□□□ 10.4
SMNDC1O75940 HMBS-222ENST00000545621 1282 ntTSL 1 (best)14.23□□□□□ -0.136e-7■□□□□ 10.4
SMNDC1O75940 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.272e-7■□□□□ 10.3
SMNDC1O75940 MAN2A2-204ENST00000558161 4918 ntTSL 1 (best)12.6□□□□□ -0.392e-7■□□□□ 10.3
SMNDC1O75940 HAUS6-202ENST00000380502 6536 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.392e-34■□□□□ 10.3
SMNDC1O75940 HAUS6-201ENST00000380496 3756 ntTSL 2 BASIC9.85□□□□□ -0.832e-34■□□□□ 10.3
SMNDC1O75940 HAUS6-203ENST00000415524 680 ntTSL 26.94□□□□□ -1.32e-34■□□□□ 10.3
SMNDC1O75940 SCARNA8-201ENST00000515924 131 ntBASIC3.93□□□□□ -1.782e-34■□□□□ 10.3
SMNDC1O75940 ARHGAP4-224ENST00000494813 1939 ntTSL 521.53■■□□□ 1.046e-7■□□□□ 10.3
SMNDC1O75940 ARHGAP4-222ENST00000494302 2667 ntTSL 518.93■□□□□ 0.626e-7■□□□□ 10.3
SMNDC1O75940 ARHGAP4-219ENST00000470209 2889 ntTSL 518.02■□□□□ 0.486e-7■□□□□ 10.3
SMNDC1O75940 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.76■□□□□ 0.436e-7■□□□□ 10.3
SMNDC1O75940 ARHGAP4-205ENST00000404127 3232 ntTSL 517.56■□□□□ 0.46e-7■□□□□ 10.3
SMNDC1O75940 ARHGAP4-207ENST00000420383 2817 ntTSL 217.15■□□□□ 0.346e-7■□□□□ 10.3
SMNDC1O75940 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.156e-7■□□□□ 10.3
SMNDC1O75940 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.056e-7■□□□□ 10.3
SMNDC1O75940 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.116e-7■□□□□ 10.3
SMNDC1O75940 ARHGAP4-209ENST00000422918 642 ntTSL 512.55□□□□□ -0.46e-7■□□□□ 10.3
SMNDC1O75940 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC23.46■■□□□ 1.353e-7■□□□□ 10.3
SMNDC1O75940 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.253e-7■□□□□ 10.3
SMNDC1O75940 UBE2S-202ENST00000587845 743 ntTSL 221.3■■□□□ 13e-7■□□□□ 10.3
SMNDC1O75940 NARF-216ENST00000581202 1013 ntTSL 517.65■□□□□ 0.423e-6■□□□□ 10.2
SMNDC1O75940 SLC2A4RG-207ENST00000493772 1328 ntTSL 1 (best)17.95■□□□□ 0.462e-10■□□□□ 10.2
SMNDC1O75940 SLC2A4RG-202ENST00000473157 991 ntTSL 315.58■□□□□ 0.082e-10■□□□□ 10.2
SMNDC1O75940 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.632e-7■□□□□ 10.2
SMNDC1O75940 FKBP10-206ENST00000489591 2826 ntTSL 217.98■□□□□ 0.472e-7■□□□□ 10.2
SMNDC1O75940 ATP6V0B-210ENST00000498208 419 ntTSL 520.91■□□□□ 0.941e-6■□□□□ 10.2
SMNDC1O75940 TBL3-206ENST00000569628 2594 ntTSL 217.79■□□□□ 0.441e-6■□□□□ 10.2
SMNDC1O75940 PSRC1-210ENST00000471740 738 ntTSL 317.65■□□□□ 0.421e-6■□□□□ 10.2
SMNDC1O75940 TBL3-201ENST00000332704 2091 ntAPPRIS ALT2 TSL 1 (best)17■□□□□ 0.311e-6■□□□□ 10.2
SMNDC1O75940 PSRC1-209ENST00000459765 839 ntTSL 216.97■□□□□ 0.311e-6■□□□□ 10.2
SMNDC1O75940 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.291e-6■□□□□ 10.2
SMNDC1O75940 PPP1R12C-205ENST00000588277 419 ntTSL 316.84■□□□□ 0.291e-6■□□□□ 10.2
SMNDC1O75940 MFSD2B-204ENST00000469562 2613 ntTSL 1 (best)16.83■□□□□ 0.281e-6■□□□□ 10.2
SMNDC1O75940 MTHFR-218ENST00000641909 2254 nt16.08■□□□□ 0.171e-6■□□□□ 10.2
SMNDC1O75940 MTHFR-211ENST00000641437 1911 nt15.98■□□□□ 0.151e-6■□□□□ 10.2
SMNDC1O75940 ATP6V0B-202ENST00000461670 530 ntTSL 515.85■□□□□ 0.131e-6■□□□□ 10.2
SMNDC1O75940 TBL3-204ENST00000567615 1047 ntTSL 215.13■□□□□ 0.011e-6■□□□□ 10.2
SMNDC1O75940 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC15.02■□□□□ -01e-6■□□□□ 10.2
SMNDC1O75940 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.031e-6■□□□□ 10.2
SMNDC1O75940 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.061e-6■□□□□ 10.2
SMNDC1O75940 PPP1R12C-208ENST00000592754 827 ntTSL 214.54□□□□□ -0.081e-6■□□□□ 10.2
SMNDC1O75940 TBL3-207ENST00000569792 856 ntTSL 513.06□□□□□ -0.321e-6■□□□□ 10.2
SMNDC1O75940 ZBTB40-204ENST00000404138 8992 ntAPPRIS P3 TSL 5 BASIC9.8□□□□□ -0.841e-6■□□□□ 10.2
SMNDC1O75940 ZBTB40-203ENST00000400239 1855 ntTSL 59.57□□□□□ -0.881e-6■□□□□ 10.2
SMNDC1O75940 ZBTB40-202ENST00000375647 8685 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.921e-6■□□□□ 10.2
SMNDC1O75940 ZBTB40-201ENST00000374651 8368 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.931e-6■□□□□ 10.2
SMNDC1O75940 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.02■□□□□ -04e-17■□□□□ 10.2
SMNDC1O75940 TTLL3-215ENST00000438141 1743 ntTSL 212.57□□□□□ -0.44e-17■□□□□ 10.2
SMNDC1O75940 TTLL3-233ENST00000602338 693 nt10.79□□□□□ -0.684e-17■□□□□ 10.2
SMNDC1O75940 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.65■□□□□ 0.744e-6■□□□□ 10.2
SMNDC1O75940 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.64e-6■□□□□ 10.2
SMNDC1O75940 KANSL1-223ENST00000639150 1815 ntTSL 516.22■□□□□ 0.194e-6■□□□□ 10.2
SMNDC1O75940 KANSL1-203ENST00000571698 2276 ntTSL 515.73■□□□□ 0.114e-6■□□□□ 10.2
SMNDC1O75940 KANSL1-215ENST00000576870 2848 ntTSL 213.85□□□□□ -0.194e-6■□□□□ 10.2
SMNDC1O75940 KANSL1-229ENST00000639531 2731 ntTSL 513□□□□□ -0.334e-6■□□□□ 10.2
SMNDC1O75940 KANSL1-208ENST00000574590 5147 ntAPPRIS ALT1 TSL 2 BASIC12.42□□□□□ -0.424e-6■□□□□ 10.2
SMNDC1O75940 KANSL1-211ENST00000575318 4935 ntTSL 5 BASIC11.64□□□□□ -0.554e-6■□□□□ 10.2
SMNDC1O75940 KANSL1-201ENST00000262419 5309 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.624e-6■□□□□ 10.2
SMNDC1O75940 KANSL1-205ENST00000572904 4973 ntAPPRIS P3 TSL 5 BASIC9.56□□□□□ -0.884e-6■□□□□ 10.2
SMNDC1O75940 KANSL1-206ENST00000573286 5437 ntTSL 29.34□□□□□ -0.914e-6■□□□□ 10.2
SMNDC1O75940 KANSL1-204ENST00000572218 9095 ntTSL 1 (best)9.12□□□□□ -0.954e-6■□□□□ 10.2
Retrieved 100 of 11,362 protein–RNA pairs in 255.1 ms