Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.49■□□□□ 0.23
UPK1BO75841 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
UPK1BO75841 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UPK1BO75841 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UPK1BO75841 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UPK1BO75841 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UPK1BO75841 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UPK1BO75841 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.49■□□□□ 0.23
UPK1BO75841 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UPK1BO75841 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UPK1BO75841 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
UPK1BO75841 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
UPK1BO75841 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC16.49■□□□□ 0.23
UPK1BO75841 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC16.49■□□□□ 0.23
UPK1BO75841 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
UPK1BO75841 AC138907.5-202ENST00000569484 235 ntBASIC16.49■□□□□ 0.23
UPK1BO75841 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC16.49■□□□□ 0.23
UPK1BO75841 ABHD17AP5-201ENST00000580133 923 ntBASIC16.49■□□□□ 0.23
UPK1BO75841 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
UPK1BO75841 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.49■□□□□ 0.23
UPK1BO75841 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UPK1BO75841 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UPK1BO75841 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UPK1BO75841 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
UPK1BO75841 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC16.49■□□□□ 0.23
UPK1BO75841 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UPK1BO75841 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.49■□□□□ 0.23
UPK1BO75841 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
UPK1BO75841 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
UPK1BO75841 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
UPK1BO75841 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.48■□□□□ 0.23
UPK1BO75841 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
UPK1BO75841 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
UPK1BO75841 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
UPK1BO75841 SDHAP1-207ENST00000440850 2000 ntBASIC16.48■□□□□ 0.23
UPK1BO75841 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
UPK1BO75841 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.48■□□□□ 0.23
UPK1BO75841 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
UPK1BO75841 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.48■□□□□ 0.23
UPK1BO75841 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.48■□□□□ 0.23
UPK1BO75841 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
UPK1BO75841 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
UPK1BO75841 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
UPK1BO75841 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.48■□□□□ 0.23
UPK1BO75841 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
UPK1BO75841 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC16.48■□□□□ 0.23
UPK1BO75841 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
UPK1BO75841 AL358852.1-201ENST00000623174 1268 ntBASIC16.48■□□□□ 0.23
UPK1BO75841 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
UPK1BO75841 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
UPK1BO75841 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
UPK1BO75841 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.48■□□□□ 0.23
UPK1BO75841 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.48■□□□□ 0.23
UPK1BO75841 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
UPK1BO75841 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.48■□□□□ 0.23
UPK1BO75841 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
UPK1BO75841 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
UPK1BO75841 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
UPK1BO75841 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
UPK1BO75841 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
UPK1BO75841 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
UPK1BO75841 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.47■□□□□ 0.23
UPK1BO75841 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
UPK1BO75841 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.47■□□□□ 0.23
UPK1BO75841 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UPK1BO75841 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UPK1BO75841 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.47■□□□□ 0.23
UPK1BO75841 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC16.47■□□□□ 0.23
UPK1BO75841 LHPP-203ENST00000392757 840 ntTSL 3 BASIC16.47■□□□□ 0.23
UPK1BO75841 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC16.47■□□□□ 0.23
UPK1BO75841 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC16.47■□□□□ 0.23
UPK1BO75841 DUX4L19-201ENST00000557448 1267 ntBASIC16.47■□□□□ 0.23
UPK1BO75841 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC16.47■□□□□ 0.23
UPK1BO75841 RASSF1-AS1-201ENST00000629828 790 ntBASIC16.47■□□□□ 0.23
UPK1BO75841 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
UPK1BO75841 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UPK1BO75841 AL121761.2-201ENST00000598007 1648 ntBASIC16.47■□□□□ 0.23
UPK1BO75841 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.47■□□□□ 0.23
UPK1BO75841 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
UPK1BO75841 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
UPK1BO75841 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UPK1BO75841 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
UPK1BO75841 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UPK1BO75841 AP001094.4-201ENST00000579008 2176 ntBASIC16.47■□□□□ 0.23
UPK1BO75841 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UPK1BO75841 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
UPK1BO75841 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
UPK1BO75841 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.46■□□□□ 0.23
UPK1BO75841 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.46■□□□□ 0.23
UPK1BO75841 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
UPK1BO75841 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC16.46■□□□□ 0.23
UPK1BO75841 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC16.46■□□□□ 0.23
UPK1BO75841 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
UPK1BO75841 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
UPK1BO75841 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
UPK1BO75841 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
UPK1BO75841 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UPK1BO75841 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
UPK1BO75841 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.46■□□□□ 0.23
UPK1BO75841 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms