Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.62■□□□□ 0.41
TRIM3O75382 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM3O75382 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM3O75382 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
TRIM3O75382 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM3O75382 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.62■□□□□ 0.41
TRIM3O75382 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM3O75382 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
TRIM3O75382 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM3O75382 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.62■□□□□ 0.41
TRIM3O75382 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.62■□□□□ 0.41
TRIM3O75382 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.62■□□□□ 0.41
TRIM3O75382 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM3O75382 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM3O75382 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM3O75382 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM3O75382 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
TRIM3O75382 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM3O75382 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM3O75382 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM3O75382 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM3O75382 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.61■□□□□ 0.41
TRIM3O75382 LINC01465-201ENST00000408887 1940 ntBASIC17.61■□□□□ 0.41
TRIM3O75382 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM3O75382 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TRIM3O75382 AC211429.1-201ENST00000415277 523 ntBASIC17.61■□□□□ 0.41
TRIM3O75382 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.61■□□□□ 0.41
TRIM3O75382 FITM1-202ENST00000559294 800 ntBASIC17.61■□□□□ 0.41
TRIM3O75382 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM3O75382 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.61■□□□□ 0.41
TRIM3O75382 AC011298.2-201ENST00000617989 482 ntBASIC17.61■□□□□ 0.41
TRIM3O75382 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.61■□□□□ 0.41
TRIM3O75382 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM3O75382 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM3O75382 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM3O75382 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.61■□□□□ 0.41
TRIM3O75382 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM3O75382 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
TRIM3O75382 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.61■□□□□ 0.41
TRIM3O75382 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.61■□□□□ 0.41
TRIM3O75382 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM3O75382 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM3O75382 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
TRIM3O75382 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM3O75382 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
TRIM3O75382 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.6■□□□□ 0.41
TRIM3O75382 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM3O75382 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM3O75382 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM3O75382 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM3O75382 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM3O75382 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM3O75382 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM3O75382 AC008040.2-201ENST00000461049 708 ntBASIC17.6■□□□□ 0.41
TRIM3O75382 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.6■□□□□ 0.41
TRIM3O75382 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.6■□□□□ 0.41
TRIM3O75382 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
TRIM3O75382 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.6■□□□□ 0.41
TRIM3O75382 AP000692.2-201ENST00000608391 879 ntBASIC17.6■□□□□ 0.41
TRIM3O75382 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.6■□□□□ 0.41
TRIM3O75382 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.6■□□□□ 0.41
TRIM3O75382 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.6■□□□□ 0.41
TRIM3O75382 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM3O75382 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TRIM3O75382 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM3O75382 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
TRIM3O75382 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.6■□□□□ 0.41
TRIM3O75382 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM3O75382 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM3O75382 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM3O75382 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM3O75382 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM3O75382 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM3O75382 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TRIM3O75382 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM3O75382 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.59■□□□□ 0.41
TRIM3O75382 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM3O75382 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM3O75382 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM3O75382 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.59■□□□□ 0.41
TRIM3O75382 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM3O75382 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM3O75382 MIR1238-201ENST00000408483 83 ntBASIC17.59■□□□□ 0.41
TRIM3O75382 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.59■□□□□ 0.41
TRIM3O75382 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.59■□□□□ 0.41
TRIM3O75382 AC091390.4-202ENST00000476426 537 ntBASIC17.59■□□□□ 0.41
TRIM3O75382 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.59■□□□□ 0.41
TRIM3O75382 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.59■□□□□ 0.41
TRIM3O75382 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.59■□□□□ 0.41
TRIM3O75382 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.59■□□□□ 0.41
TRIM3O75382 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM3O75382 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM3O75382 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM3O75382 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM3O75382 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM3O75382 AC093484.2-201ENST00000580996 2166 ntBASIC17.59■□□□□ 0.41
TRIM3O75382 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.59■□□□□ 0.41
TRIM3O75382 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM3O75382 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM3O75382 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms