Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CPNE3O75131 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
CPNE3O75131 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CPNE3O75131 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.13■□□□□ 0.49
CPNE3O75131 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CPNE3O75131 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.13■□□□□ 0.49
CPNE3O75131 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CPNE3O75131 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CPNE3O75131 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CPNE3O75131 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CPNE3O75131 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CPNE3O75131 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
CPNE3O75131 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CPNE3O75131 ZNF815P-204ENST00000434898 1737 ntBASIC18.12■□□□□ 0.49
CPNE3O75131 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
CPNE3O75131 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
CPNE3O75131 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CPNE3O75131 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CPNE3O75131 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CPNE3O75131 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CPNE3O75131 RNF152P1-201ENST00000397754 604 ntBASIC18.12■□□□□ 0.49
CPNE3O75131 AC063952.2-201ENST00000498792 1227 ntBASIC18.12■□□□□ 0.49
CPNE3O75131 AP003041.3-201ENST00000527151 707 ntBASIC18.12■□□□□ 0.49
CPNE3O75131 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CPNE3O75131 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CPNE3O75131 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CPNE3O75131 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CPNE3O75131 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CPNE3O75131 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.12■□□□□ 0.49
CPNE3O75131 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CPNE3O75131 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CPNE3O75131 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CPNE3O75131 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
CPNE3O75131 AC104417.2-201ENST00000562989 1793 ntBASIC18.12■□□□□ 0.49
CPNE3O75131 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CPNE3O75131 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CPNE3O75131 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CPNE3O75131 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CPNE3O75131 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.11■□□□□ 0.49
CPNE3O75131 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.11■□□□□ 0.49
CPNE3O75131 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.11■□□□□ 0.49
CPNE3O75131 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CPNE3O75131 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CPNE3O75131 YBX1P2-201ENST00000489612 999 ntBASIC18.11■□□□□ 0.49
CPNE3O75131 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.11■□□□□ 0.49
CPNE3O75131 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CPNE3O75131 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CPNE3O75131 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CPNE3O75131 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.11■□□□□ 0.49
CPNE3O75131 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
CPNE3O75131 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.11■□□□□ 0.49
CPNE3O75131 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.11■□□□□ 0.49
CPNE3O75131 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.11■□□□□ 0.49
CPNE3O75131 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CPNE3O75131 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CPNE3O75131 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.11■□□□□ 0.49
CPNE3O75131 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CPNE3O75131 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CPNE3O75131 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.11■□□□□ 0.49
CPNE3O75131 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CPNE3O75131 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CPNE3O75131 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CPNE3O75131 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CPNE3O75131 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CPNE3O75131 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CPNE3O75131 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CPNE3O75131 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CPNE3O75131 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CPNE3O75131 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.1■□□□□ 0.49
CPNE3O75131 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.1■□□□□ 0.49
CPNE3O75131 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CPNE3O75131 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CPNE3O75131 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.1■□□□□ 0.49
CPNE3O75131 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CPNE3O75131 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CPNE3O75131 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CPNE3O75131 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.1■□□□□ 0.49
CPNE3O75131 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
CPNE3O75131 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.1■□□□□ 0.49
CPNE3O75131 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.1■□□□□ 0.49
CPNE3O75131 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.1■□□□□ 0.49
CPNE3O75131 AC092647.4-201ENST00000457211 535 ntBASIC18.1■□□□□ 0.49
CPNE3O75131 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.1■□□□□ 0.49
CPNE3O75131 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.1■□□□□ 0.49
CPNE3O75131 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CPNE3O75131 AL031432.5-201ENST00000641059 760 ntBASIC18.1■□□□□ 0.49
CPNE3O75131 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CPNE3O75131 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
CPNE3O75131 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CPNE3O75131 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CPNE3O75131 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CPNE3O75131 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CPNE3O75131 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CPNE3O75131 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.09■□□□□ 0.49
CPNE3O75131 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CPNE3O75131 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.09■□□□□ 0.49
CPNE3O75131 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPNE3O75131 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPNE3O75131 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPNE3O75131 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms