Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC16.12■□□□□ 0.17
SSNA1O43805 MIR3621-201ENST00000580529 85 ntBASIC16.12■□□□□ 0.17
SSNA1O43805 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSNA1O43805 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSNA1O43805 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.12■□□□□ 0.17
SSNA1O43805 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSNA1O43805 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.12■□□□□ 0.17
SSNA1O43805 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSNA1O43805 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC16.12■□□□□ 0.17
SSNA1O43805 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSNA1O43805 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.12■□□□□ 0.17
SSNA1O43805 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSNA1O43805 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSNA1O43805 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SSNA1O43805 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SSNA1O43805 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSNA1O43805 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SSNA1O43805 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.11■□□□□ 0.17
SSNA1O43805 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SSNA1O43805 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SSNA1O43805 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSNA1O43805 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSNA1O43805 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
SSNA1O43805 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.11■□□□□ 0.17
SSNA1O43805 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSNA1O43805 NAA20-201ENST00000310450 920 ntTSL 2 BASIC16.11■□□□□ 0.17
SSNA1O43805 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSNA1O43805 AC091799.1-201ENST00000422823 811 ntBASIC16.11■□□□□ 0.17
SSNA1O43805 AC105265.2-201ENST00000467189 838 ntBASIC16.11■□□□□ 0.17
SSNA1O43805 AICDA-202ENST00000537228 667 ntTSL 5 BASIC16.11■□□□□ 0.17
SSNA1O43805 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSNA1O43805 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SSNA1O43805 AL358852.1-201ENST00000623174 1268 ntBASIC16.11■□□□□ 0.17
SSNA1O43805 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSNA1O43805 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
SSNA1O43805 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSNA1O43805 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.11■□□□□ 0.17
SSNA1O43805 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.11■□□□□ 0.17
SSNA1O43805 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
SSNA1O43805 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
SSNA1O43805 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSNA1O43805 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSNA1O43805 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.11■□□□□ 0.17
SSNA1O43805 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSNA1O43805 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC16.11■□□□□ 0.17
SSNA1O43805 AL139384.1-201ENST00000612143 3047 ntBASIC16.11■□□□□ 0.17
SSNA1O43805 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SSNA1O43805 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.1■□□□□ 0.17
SSNA1O43805 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC16.1■□□□□ 0.17
SSNA1O43805 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSNA1O43805 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSNA1O43805 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSNA1O43805 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSNA1O43805 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.1■□□□□ 0.17
SSNA1O43805 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSNA1O43805 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSNA1O43805 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSNA1O43805 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SSNA1O43805 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSNA1O43805 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSNA1O43805 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SSNA1O43805 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSNA1O43805 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC16.1■□□□□ 0.17
SSNA1O43805 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSNA1O43805 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSNA1O43805 CREM-229ENST00000474362 1030 ntTSL 2 BASIC16.1■□□□□ 0.17
SSNA1O43805 SERP1-208ENST00000491660 830 ntTSL 2 BASIC16.1■□□□□ 0.17
SSNA1O43805 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SSNA1O43805 AC138907.5-202ENST00000569484 235 ntBASIC16.1■□□□□ 0.17
SSNA1O43805 GRAMD4P7-201ENST00000578182 1232 ntBASIC16.1■□□□□ 0.17
SSNA1O43805 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC16.1■□□□□ 0.17
SSNA1O43805 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSNA1O43805 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSNA1O43805 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SSNA1O43805 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSNA1O43805 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSNA1O43805 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSNA1O43805 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSNA1O43805 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSNA1O43805 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
SSNA1O43805 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SSNA1O43805 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SSNA1O43805 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.1■□□□□ 0.17
SSNA1O43805 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSNA1O43805 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SSNA1O43805 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
SSNA1O43805 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC16.09■□□□□ 0.17
SSNA1O43805 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SSNA1O43805 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SSNA1O43805 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SSNA1O43805 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
SSNA1O43805 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SSNA1O43805 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC16.09■□□□□ 0.17
SSNA1O43805 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC16.09■□□□□ 0.17
SSNA1O43805 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SSNA1O43805 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SSNA1O43805 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.09■□□□□ 0.17
SSNA1O43805 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC16.09■□□□□ 0.17
SSNA1O43805 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SSNA1O43805 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms