Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 AC128676.1-201ENST00000454392 318 ntBASIC17.22■□□□□ 0.35
RNF13O43567 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.22■□□□□ 0.35
RNF13O43567 MIR4651-201ENST00000582622 73 ntBASIC17.22■□□□□ 0.35
RNF13O43567 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RNF13O43567 AC124016.1-201ENST00000609552 612 ntBASIC17.22■□□□□ 0.35
RNF13O43567 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RNF13O43567 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.22■□□□□ 0.35
RNF13O43567 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.22■□□□□ 0.35
RNF13O43567 HLA-A-209ENST00000638375 975 ntBASIC17.22■□□□□ 0.35
RNF13O43567 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF13O43567 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF13O43567 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF13O43567 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF13O43567 AC135050.7-201ENST00000624508 2218 ntBASIC17.22■□□□□ 0.35
RNF13O43567 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF13O43567 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
RNF13O43567 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.22■□□□□ 0.35
RNF13O43567 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF13O43567 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.22■□□□□ 0.35
RNF13O43567 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF13O43567 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.22■□□□□ 0.35
RNF13O43567 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.22■□□□□ 0.35
RNF13O43567 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.22■□□□□ 0.35
RNF13O43567 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF13O43567 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF13O43567 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
RNF13O43567 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
RNF13O43567 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF13O43567 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF13O43567 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.21■□□□□ 0.35
RNF13O43567 AC005332.8-201ENST00000622750 2735 ntBASIC17.21■□□□□ 0.35
RNF13O43567 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RNF13O43567 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF13O43567 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF13O43567 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
RNF13O43567 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.21■□□□□ 0.35
RNF13O43567 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.21■□□□□ 0.35
RNF13O43567 POU5F1P3-201ENST00000428824 1078 ntBASIC17.21■□□□□ 0.35
RNF13O43567 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.21■□□□□ 0.35
RNF13O43567 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.21■□□□□ 0.35
RNF13O43567 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.21■□□□□ 0.35
RNF13O43567 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
RNF13O43567 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF13O43567 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF13O43567 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
RNF13O43567 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RNF13O43567 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RNF13O43567 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
RNF13O43567 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RNF13O43567 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
RNF13O43567 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF13O43567 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.2■□□□□ 0.34
RNF13O43567 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RNF13O43567 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF13O43567 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
RNF13O43567 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF13O43567 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF13O43567 AC090164.3-201ENST00000610780 2143 ntBASIC17.2■□□□□ 0.34
RNF13O43567 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF13O43567 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.2■□□□□ 0.34
RNF13O43567 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF13O43567 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
RNF13O43567 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.2■□□□□ 0.34
RNF13O43567 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF13O43567 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.2■□□□□ 0.34
RNF13O43567 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF13O43567 AC133681.1-201ENST00000465482 601 ntBASIC17.2■□□□□ 0.34
RNF13O43567 C1QBPP2-201ENST00000528754 825 ntBASIC17.2■□□□□ 0.34
RNF13O43567 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RNF13O43567 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RNF13O43567 FP475955.4-201ENST00000623131 1990 ntBASIC17.2■□□□□ 0.34
RNF13O43567 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF13O43567 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF13O43567 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
RNF13O43567 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF13O43567 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF13O43567 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF13O43567 IRX1P1-201ENST00000438849 1838 ntBASIC17.19■□□□□ 0.34
RNF13O43567 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.19■□□□□ 0.34
RNF13O43567 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF13O43567 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF13O43567 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
RNF13O43567 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.19■□□□□ 0.34
RNF13O43567 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.19■□□□□ 0.34
RNF13O43567 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
RNF13O43567 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
RNF13O43567 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF13O43567 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
RNF13O43567 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.19■□□□□ 0.34
RNF13O43567 FAM201B-201ENST00000458407 597 ntBASIC17.19■□□□□ 0.34
RNF13O43567 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.19■□□□□ 0.34
RNF13O43567 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.19■□□□□ 0.34
RNF13O43567 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.19■□□□□ 0.34
RNF13O43567 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF13O43567 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.19■□□□□ 0.34
RNF13O43567 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.19■□□□□ 0.34
RNF13O43567 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.19■□□□□ 0.34
RNF13O43567 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF13O43567 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF13O43567 WIZP1-201ENST00000531444 2299 ntBASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms