Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.25■□□□□ 0.83
FOXN3O00409 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.25■□□□□ 0.83
FOXN3O00409 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
FOXN3O00409 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
FOXN3O00409 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.25■□□□□ 0.83
FOXN3O00409 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
FOXN3O00409 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
FOXN3O00409 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.24■□□□□ 0.83
FOXN3O00409 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.24■□□□□ 0.83
FOXN3O00409 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.24■□□□□ 0.83
FOXN3O00409 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
FOXN3O00409 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC20.24■□□□□ 0.83
FOXN3O00409 HEIH-201ENST00000623091 1652 ntBASIC20.24■□□□□ 0.83
FOXN3O00409 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
FOXN3O00409 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.24■□□□□ 0.83
FOXN3O00409 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.24■□□□□ 0.83
FOXN3O00409 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.24■□□□□ 0.83
FOXN3O00409 AC233702.5-201ENST00000584107 538 ntBASIC20.24■□□□□ 0.83
FOXN3O00409 Z99916.2-201ENST00000604037 246 ntBASIC20.24■□□□□ 0.83
FOXN3O00409 AP000692.2-201ENST00000608391 879 ntBASIC20.24■□□□□ 0.83
FOXN3O00409 AC113410.3-201ENST00000623366 203 ntBASIC20.24■□□□□ 0.83
FOXN3O00409 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.24■□□□□ 0.83
FOXN3O00409 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
FOXN3O00409 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
FOXN3O00409 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
FOXN3O00409 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
FOXN3O00409 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
FOXN3O00409 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
FOXN3O00409 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.24■□□□□ 0.83
FOXN3O00409 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.24■□□□□ 0.83
FOXN3O00409 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
FOXN3O00409 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.24■□□□□ 0.83
FOXN3O00409 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.23■□□□□ 0.83
FOXN3O00409 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FOXN3O00409 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
FOXN3O00409 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
FOXN3O00409 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
FOXN3O00409 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.23■□□□□ 0.83
FOXN3O00409 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.23■□□□□ 0.83
FOXN3O00409 AC116562.2-201ENST00000507042 360 ntBASIC20.23■□□□□ 0.83
FOXN3O00409 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.23■□□□□ 0.83
FOXN3O00409 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
FOXN3O00409 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FOXN3O00409 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
FOXN3O00409 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.23■□□□□ 0.83
FOXN3O00409 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
FOXN3O00409 KRT8P32-201ENST00000512863 1461 ntBASIC20.23■□□□□ 0.83
FOXN3O00409 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FOXN3O00409 AC005082.1-201ENST00000413042 2259 ntBASIC20.23■□□□□ 0.83
FOXN3O00409 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
FOXN3O00409 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FOXN3O00409 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
FOXN3O00409 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.22■□□□□ 0.83
FOXN3O00409 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FOXN3O00409 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.22■□□□□ 0.83
FOXN3O00409 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FOXN3O00409 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.22■□□□□ 0.83
FOXN3O00409 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.22■□□□□ 0.83
FOXN3O00409 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FOXN3O00409 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FOXN3O00409 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
FOXN3O00409 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FOXN3O00409 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.22■□□□□ 0.83
FOXN3O00409 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FOXN3O00409 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
FOXN3O00409 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
FOXN3O00409 AC012618.2-201ENST00000428058 849 ntBASIC20.22■□□□□ 0.83
FOXN3O00409 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
FOXN3O00409 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FOXN3O00409 NUDT16P1-203ENST00000513809 620 ntBASIC20.22■□□□□ 0.83
FOXN3O00409 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
FOXN3O00409 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.22■□□□□ 0.83
FOXN3O00409 AL049637.2-201ENST00000641778 930 ntBASIC20.22■□□□□ 0.83
FOXN3O00409 AC068587.9-201ENST00000641814 219 ntBASIC20.22■□□□□ 0.83
FOXN3O00409 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FOXN3O00409 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FOXN3O00409 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FOXN3O00409 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.22■□□□□ 0.83
FOXN3O00409 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
FOXN3O00409 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
FOXN3O00409 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
FOXN3O00409 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.21■□□□□ 0.83
FOXN3O00409 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.21■□□□□ 0.83
FOXN3O00409 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FOXN3O00409 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.21■□□□□ 0.83
FOXN3O00409 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.21■□□□□ 0.83
FOXN3O00409 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FOXN3O00409 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.21■□□□□ 0.83
FOXN3O00409 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FOXN3O00409 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FOXN3O00409 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FOXN3O00409 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
FOXN3O00409 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.21■□□□□ 0.83
FOXN3O00409 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.21■□□□□ 0.83
FOXN3O00409 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.21■□□□□ 0.83
FOXN3O00409 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
FOXN3O00409 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.21■□□□□ 0.83
FOXN3O00409 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FOXN3O00409 MTMR9LP-203ENST00000426597 1545 ntBASIC20.21■□□□□ 0.83
FOXN3O00409 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms