Protein–RNA interactions for Protein: D6RIA3

LOC285556, Uncharacterized protein, humanhuman

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC285556D6RIA3 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
LOC285556D6RIA3 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.63■■□□□ 1.05
LOC285556D6RIA3 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LOC285556D6RIA3 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
LOC285556D6RIA3 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LOC285556D6RIA3 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
LOC285556D6RIA3 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC21.63■■□□□ 1.05
LOC285556D6RIA3 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LOC285556D6RIA3 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
LOC285556D6RIA3 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC21.63■■□□□ 1.05
LOC285556D6RIA3 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
LOC285556D6RIA3 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
LOC285556D6RIA3 AL592071.1-201ENST00000611956 408 ntBASIC21.63■■□□□ 1.05
LOC285556D6RIA3 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
LOC285556D6RIA3 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC21.62■■□□□ 1.05
LOC285556D6RIA3 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
LOC285556D6RIA3 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
LOC285556D6RIA3 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC21.62■■□□□ 1.05
LOC285556D6RIA3 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
LOC285556D6RIA3 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
LOC285556D6RIA3 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
LOC285556D6RIA3 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
LOC285556D6RIA3 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC21.62■■□□□ 1.05
LOC285556D6RIA3 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC21.62■■□□□ 1.05
LOC285556D6RIA3 BET1L-206ENST00000486280 665 ntTSL 3 BASIC21.62■■□□□ 1.05
LOC285556D6RIA3 KRT18P31-201ENST00000506277 1292 ntBASIC21.62■■□□□ 1.05
LOC285556D6RIA3 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC21.62■■□□□ 1.05
LOC285556D6RIA3 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC21.62■■□□□ 1.05
LOC285556D6RIA3 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC21.62■■□□□ 1.05
LOC285556D6RIA3 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC21.62■■□□□ 1.05
LOC285556D6RIA3 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
LOC285556D6RIA3 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LOC285556D6RIA3 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
LOC285556D6RIA3 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
LOC285556D6RIA3 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
LOC285556D6RIA3 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LOC285556D6RIA3 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LOC285556D6RIA3 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
LOC285556D6RIA3 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LOC285556D6RIA3 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LOC285556D6RIA3 PBK-203ENST00000522944 1499 ntTSL 2 BASIC21.61■■□□□ 1.05
LOC285556D6RIA3 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC21.61■■□□□ 1.05
LOC285556D6RIA3 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
LOC285556D6RIA3 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LOC285556D6RIA3 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC21.61■■□□□ 1.05
LOC285556D6RIA3 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
LOC285556D6RIA3 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC21.61■■□□□ 1.05
LOC285556D6RIA3 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
LOC285556D6RIA3 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
LOC285556D6RIA3 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LOC285556D6RIA3 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
LOC285556D6RIA3 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC21.61■■□□□ 1.05
LOC285556D6RIA3 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC21.61■■□□□ 1.05
LOC285556D6RIA3 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC21.61■■□□□ 1.05
LOC285556D6RIA3 AL671883.3-201ENST00000603274 991 ntBASIC21.61■■□□□ 1.05
LOC285556D6RIA3 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC21.61■■□□□ 1.05
LOC285556D6RIA3 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
LOC285556D6RIA3 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC21.61■■□□□ 1.05
LOC285556D6RIA3 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LOC285556D6RIA3 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LOC285556D6RIA3 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
LOC285556D6RIA3 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC21.6■■□□□ 1.05
LOC285556D6RIA3 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LOC285556D6RIA3 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
LOC285556D6RIA3 PWWP2AP1-201ENST00000429776 2273 ntBASIC21.6■■□□□ 1.05
LOC285556D6RIA3 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LOC285556D6RIA3 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
LOC285556D6RIA3 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LOC285556D6RIA3 AKR1C7P-201ENST00000305623 895 ntBASIC21.6■■□□□ 1.05
LOC285556D6RIA3 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LOC285556D6RIA3 AL022342.1-201ENST00000400363 863 ntBASIC21.6■■□□□ 1.05
LOC285556D6RIA3 AC106795.1-205ENST00000512851 1056 ntBASIC21.6■■□□□ 1.05
LOC285556D6RIA3 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC21.6■■□□□ 1.05
LOC285556D6RIA3 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
LOC285556D6RIA3 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LOC285556D6RIA3 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
LOC285556D6RIA3 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LOC285556D6RIA3 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
LOC285556D6RIA3 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LOC285556D6RIA3 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
LOC285556D6RIA3 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LOC285556D6RIA3 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.59■■□□□ 1.05
LOC285556D6RIA3 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
LOC285556D6RIA3 FOSL1P1-201ENST00000511041 816 ntBASIC21.59■■□□□ 1.05
LOC285556D6RIA3 AP002469.2-201ENST00000531724 424 ntBASIC21.59■■□□□ 1.05
LOC285556D6RIA3 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
LOC285556D6RIA3 AC034236.2-201ENST00000606662 1610 ntBASIC21.59■■□□□ 1.05
LOC285556D6RIA3 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.59■■□□□ 1.05
LOC285556D6RIA3 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LOC285556D6RIA3 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
LOC285556D6RIA3 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
LOC285556D6RIA3 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC21.59■■□□□ 1.05
LOC285556D6RIA3 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LOC285556D6RIA3 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC21.59■■□□□ 1.05
LOC285556D6RIA3 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LOC285556D6RIA3 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
LOC285556D6RIA3 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
LOC285556D6RIA3 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC21.59■■□□□ 1.05
LOC285556D6RIA3 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
LOC285556D6RIA3 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms