Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM49BA6NDI0 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM49BA6NDI0 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.84■□□□□ 0.93
TRIM49BA6NDI0 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.84■□□□□ 0.93
TRIM49BA6NDI0 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
TRIM49BA6NDI0 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.84■□□□□ 0.93
TRIM49BA6NDI0 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM49BA6NDI0 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM49BA6NDI0 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
TRIM49BA6NDI0 CR392000.1-201ENST00000624770 1228 ntBASIC20.84■□□□□ 0.93
TRIM49BA6NDI0 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC20.84■□□□□ 0.93
TRIM49BA6NDI0 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM49BA6NDI0 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM49BA6NDI0 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
TRIM49BA6NDI0 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.84■□□□□ 0.93
TRIM49BA6NDI0 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRIM49BA6NDI0 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.83■□□□□ 0.93
TRIM49BA6NDI0 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TRIM49BA6NDI0 AL499627.1-201ENST00000569373 2188 ntBASIC20.83■□□□□ 0.93
TRIM49BA6NDI0 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.83■□□□□ 0.93
TRIM49BA6NDI0 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.83■□□□□ 0.93
TRIM49BA6NDI0 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
TRIM49BA6NDI0 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
TRIM49BA6NDI0 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.83■□□□□ 0.93
TRIM49BA6NDI0 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.83■□□□□ 0.93
TRIM49BA6NDI0 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.83■□□□□ 0.93
TRIM49BA6NDI0 KSR1P1-201ENST00000446298 240 ntBASIC20.83■□□□□ 0.93
TRIM49BA6NDI0 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TRIM49BA6NDI0 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.83■□□□□ 0.93
TRIM49BA6NDI0 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.83■□□□□ 0.93
TRIM49BA6NDI0 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRIM49BA6NDI0 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRIM49BA6NDI0 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRIM49BA6NDI0 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
TRIM49BA6NDI0 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
TRIM49BA6NDI0 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRIM49BA6NDI0 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRIM49BA6NDI0 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.83■□□□□ 0.92
TRIM49BA6NDI0 HEIH-201ENST00000623091 1652 ntBASIC20.83■□□□□ 0.92
TRIM49BA6NDI0 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
TRIM49BA6NDI0 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRIM49BA6NDI0 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRIM49BA6NDI0 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.83■□□□□ 0.92
TRIM49BA6NDI0 AC126763.1-201ENST00000552015 2118 ntBASIC20.83■□□□□ 0.92
TRIM49BA6NDI0 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRIM49BA6NDI0 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.83■□□□□ 0.92
TRIM49BA6NDI0 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRIM49BA6NDI0 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM49BA6NDI0 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM49BA6NDI0 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM49BA6NDI0 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM49BA6NDI0 KRT16P1-201ENST00000399124 1418 ntBASIC20.82■□□□□ 0.92
TRIM49BA6NDI0 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM49BA6NDI0 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM49BA6NDI0 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.82■□□□□ 0.92
TRIM49BA6NDI0 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM49BA6NDI0 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM49BA6NDI0 AF186192.3-201ENST00000583427 947 ntBASIC20.82■□□□□ 0.92
TRIM49BA6NDI0 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20.82■□□□□ 0.92
TRIM49BA6NDI0 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM49BA6NDI0 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM49BA6NDI0 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM49BA6NDI0 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM49BA6NDI0 MTMR9LP-203ENST00000426597 1545 ntBASIC20.82■□□□□ 0.92
TRIM49BA6NDI0 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM49BA6NDI0 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM49BA6NDI0 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.82■□□□□ 0.92
TRIM49BA6NDI0 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM49BA6NDI0 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
TRIM49BA6NDI0 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
TRIM49BA6NDI0 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
TRIM49BA6NDI0 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM49BA6NDI0 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM49BA6NDI0 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM49BA6NDI0 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM49BA6NDI0 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
TRIM49BA6NDI0 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM49BA6NDI0 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM49BA6NDI0 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.81■□□□□ 0.92
TRIM49BA6NDI0 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM49BA6NDI0 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM49BA6NDI0 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM49BA6NDI0 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM49BA6NDI0 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM49BA6NDI0 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.81■□□□□ 0.92
TRIM49BA6NDI0 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.81■□□□□ 0.92
TRIM49BA6NDI0 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.81■□□□□ 0.92
TRIM49BA6NDI0 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
TRIM49BA6NDI0 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM49BA6NDI0 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM49BA6NDI0 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM49BA6NDI0 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.8■□□□□ 0.92
TRIM49BA6NDI0 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM49BA6NDI0 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.8■□□□□ 0.92
TRIM49BA6NDI0 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM49BA6NDI0 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.8■□□□□ 0.92
TRIM49BA6NDI0 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
TRIM49BA6NDI0 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.8■□□□□ 0.92
TRIM49BA6NDI0 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM49BA6NDI0 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms