Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
CCDC162PA2VCL2 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CCDC162PA2VCL2 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.91■□□□□ 0.62
CCDC162PA2VCL2 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC162PA2VCL2 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC162PA2VCL2 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.91■□□□□ 0.62
CCDC162PA2VCL2 AC083906.6-201ENST00000641366 219 ntBASIC18.91■□□□□ 0.62
CCDC162PA2VCL2 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC162PA2VCL2 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC162PA2VCL2 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CCDC162PA2VCL2 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.91■□□□□ 0.62
CCDC162PA2VCL2 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.91■□□□□ 0.62
CCDC162PA2VCL2 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC162PA2VCL2 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC162PA2VCL2 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CCDC162PA2VCL2 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC162PA2VCL2 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC162PA2VCL2 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC162PA2VCL2 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CCDC162PA2VCL2 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC162PA2VCL2 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC162PA2VCL2 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CCDC162PA2VCL2 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CCDC162PA2VCL2 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC162PA2VCL2 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC162PA2VCL2 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC162PA2VCL2 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC162PA2VCL2 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.9■□□□□ 0.62
CCDC162PA2VCL2 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.9■□□□□ 0.62
CCDC162PA2VCL2 REXO1L10P-201ENST00000615707 1290 ntBASIC18.9■□□□□ 0.62
CCDC162PA2VCL2 REXO1L12P-201ENST00000622156 912 ntBASIC18.9■□□□□ 0.62
CCDC162PA2VCL2 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC162PA2VCL2 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC162PA2VCL2 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC162PA2VCL2 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.9■□□□□ 0.62
CCDC162PA2VCL2 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC162PA2VCL2 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC162PA2VCL2 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC162PA2VCL2 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC162PA2VCL2 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC162PA2VCL2 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC162PA2VCL2 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC162PA2VCL2 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC162PA2VCL2 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC162PA2VCL2 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.9■□□□□ 0.62
CCDC162PA2VCL2 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC162PA2VCL2 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
CCDC162PA2VCL2 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.89■□□□□ 0.62
CCDC162PA2VCL2 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
CCDC162PA2VCL2 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC162PA2VCL2 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.89■□□□□ 0.61
CCDC162PA2VCL2 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC162PA2VCL2 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC162PA2VCL2 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC162PA2VCL2 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC162PA2VCL2 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC162PA2VCL2 AL031598.1-201ENST00000561511 1773 ntBASIC18.89■□□□□ 0.61
CCDC162PA2VCL2 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.89■□□□□ 0.61
CCDC162PA2VCL2 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC162PA2VCL2 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC162PA2VCL2 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC162PA2VCL2 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC162PA2VCL2 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
CCDC162PA2VCL2 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC162PA2VCL2 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.89■□□□□ 0.61
CCDC162PA2VCL2 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC162PA2VCL2 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC162PA2VCL2 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC162PA2VCL2 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.89■□□□□ 0.61
CCDC162PA2VCL2 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.89■□□□□ 0.61
CCDC162PA2VCL2 AC026471.5-201ENST00000615068 467 ntBASIC18.89■□□□□ 0.61
CCDC162PA2VCL2 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CCDC162PA2VCL2 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC162PA2VCL2 AL512353.2-201ENST00000448759 1962 ntBASIC18.89■□□□□ 0.61
CCDC162PA2VCL2 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.89■□□□□ 0.61
CCDC162PA2VCL2 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC162PA2VCL2 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC162PA2VCL2 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC162PA2VCL2 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.89■□□□□ 0.61
CCDC162PA2VCL2 AC093525.10-201ENST00000625130 1569 ntBASIC18.89■□□□□ 0.61
CCDC162PA2VCL2 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC162PA2VCL2 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
CCDC162PA2VCL2 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC162PA2VCL2 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC162PA2VCL2 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CCDC162PA2VCL2 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC162PA2VCL2 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC162PA2VCL2 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC162PA2VCL2 TSPY7P-201ENST00000431358 1114 ntBASIC18.88■□□□□ 0.61
CCDC162PA2VCL2 AL355355.2-201ENST00000442321 338 ntBASIC18.88■□□□□ 0.61
CCDC162PA2VCL2 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC162PA2VCL2 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.88■□□□□ 0.61
CCDC162PA2VCL2 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC162PA2VCL2 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.88■□□□□ 0.61
CCDC162PA2VCL2 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
CCDC162PA2VCL2 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CCDC162PA2VCL2 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CCDC162PA2VCL2 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.88■□□□□ 0.61
CCDC162PA2VCL2 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CCDC162PA2VCL2 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms