Protein–RNA interactions for Protein: A0A087X179

TBC1D3E, TBC1 domain family member 3E, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3EA0A087X179 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TBC1D3EA0A087X179 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.82■□□□□ 0.6
TBC1D3EA0A087X179 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TBC1D3EA0A087X179 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TBC1D3EA0A087X179 AC005332.1-201ENST00000577698 1310 ntBASIC18.82■□□□□ 0.6
TBC1D3EA0A087X179 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TBC1D3EA0A087X179 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TBC1D3EA0A087X179 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TBC1D3EA0A087X179 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
TBC1D3EA0A087X179 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TBC1D3EA0A087X179 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.82■□□□□ 0.6
TBC1D3EA0A087X179 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TBC1D3EA0A087X179 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.82■□□□□ 0.6
TBC1D3EA0A087X179 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TBC1D3EA0A087X179 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TBC1D3EA0A087X179 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.82■□□□□ 0.6
TBC1D3EA0A087X179 ZNF444P1-201ENST00000559497 298 ntBASIC18.82■□□□□ 0.6
TBC1D3EA0A087X179 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
TBC1D3EA0A087X179 AC024243.1-201ENST00000609234 778 ntBASIC18.82■□□□□ 0.6
TBC1D3EA0A087X179 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TBC1D3EA0A087X179 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.82■□□□□ 0.6
TBC1D3EA0A087X179 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
TBC1D3EA0A087X179 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
TBC1D3EA0A087X179 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TBC1D3EA0A087X179 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TBC1D3EA0A087X179 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.82■□□□□ 0.6
TBC1D3EA0A087X179 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.82■□□□□ 0.6
TBC1D3EA0A087X179 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.82■□□□□ 0.6
TBC1D3EA0A087X179 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.82■□□□□ 0.6
TBC1D3EA0A087X179 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TBC1D3EA0A087X179 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TBC1D3EA0A087X179 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.81■□□□□ 0.6
TBC1D3EA0A087X179 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TBC1D3EA0A087X179 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TBC1D3EA0A087X179 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TBC1D3EA0A087X179 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TBC1D3EA0A087X179 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
TBC1D3EA0A087X179 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TBC1D3EA0A087X179 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TBC1D3EA0A087X179 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.81■□□□□ 0.6
TBC1D3EA0A087X179 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TBC1D3EA0A087X179 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TBC1D3EA0A087X179 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.81■□□□□ 0.6
TBC1D3EA0A087X179 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TBC1D3EA0A087X179 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.81■□□□□ 0.6
TBC1D3EA0A087X179 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.81■□□□□ 0.6
TBC1D3EA0A087X179 MIR3180-5-201ENST00000583743 153 ntBASIC18.81■□□□□ 0.6
TBC1D3EA0A087X179 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.81■□□□□ 0.6
TBC1D3EA0A087X179 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.81■□□□□ 0.6
TBC1D3EA0A087X179 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.81■□□□□ 0.6
TBC1D3EA0A087X179 AC093458.2-201ENST00000623150 629 ntBASIC18.81■□□□□ 0.6
TBC1D3EA0A087X179 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TBC1D3EA0A087X179 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.81■□□□□ 0.6
TBC1D3EA0A087X179 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.81■□□□□ 0.6
TBC1D3EA0A087X179 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TBC1D3EA0A087X179 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
TBC1D3EA0A087X179 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TBC1D3EA0A087X179 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TBC1D3EA0A087X179 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TBC1D3EA0A087X179 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.81■□□□□ 0.6
TBC1D3EA0A087X179 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TBC1D3EA0A087X179 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
TBC1D3EA0A087X179 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TBC1D3EA0A087X179 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.8■□□□□ 0.6
TBC1D3EA0A087X179 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.8■□□□□ 0.6
TBC1D3EA0A087X179 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TBC1D3EA0A087X179 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TBC1D3EA0A087X179 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.8■□□□□ 0.6
TBC1D3EA0A087X179 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TBC1D3EA0A087X179 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TBC1D3EA0A087X179 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TBC1D3EA0A087X179 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TBC1D3EA0A087X179 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
TBC1D3EA0A087X179 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TBC1D3EA0A087X179 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
TBC1D3EA0A087X179 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.8■□□□□ 0.6
TBC1D3EA0A087X179 SPDYE15P-201ENST00000424157 909 ntBASIC18.8■□□□□ 0.6
TBC1D3EA0A087X179 AC034232.1-201ENST00000506026 1064 ntBASIC18.8■□□□□ 0.6
TBC1D3EA0A087X179 AL136038.3-201ENST00000561909 1096 ntBASIC18.8■□□□□ 0.6
TBC1D3EA0A087X179 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
TBC1D3EA0A087X179 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.8■□□□□ 0.6
TBC1D3EA0A087X179 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TBC1D3EA0A087X179 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.8■□□□□ 0.6
TBC1D3EA0A087X179 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.8■□□□□ 0.6
TBC1D3EA0A087X179 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.8■□□□□ 0.6
TBC1D3EA0A087X179 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TBC1D3EA0A087X179 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.79■□□□□ 0.6
TBC1D3EA0A087X179 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.79■□□□□ 0.6
TBC1D3EA0A087X179 TEX21P-204ENST00000641479 1693 ntBASIC18.79■□□□□ 0.6
TBC1D3EA0A087X179 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
TBC1D3EA0A087X179 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TBC1D3EA0A087X179 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TBC1D3EA0A087X179 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TBC1D3EA0A087X179 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.79■□□□□ 0.6
TBC1D3EA0A087X179 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.79■□□□□ 0.6
TBC1D3EA0A087X179 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
TBC1D3EA0A087X179 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TBC1D3EA0A087X179 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
TBC1D3EA0A087X179 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TBC1D3EA0A087X179 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms