Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.69
TRIM35Q9UPQ4 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC4.52□□□□□ -1.69
TRIM35Q9UPQ4 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TRIM35Q9UPQ4 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TRIM35Q9UPQ4 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TRIM35Q9UPQ4 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
TRIM35Q9UPQ4 RNU6-686P-201ENST00000364839 107 ntBASIC4.52□□□□□ -1.69
TRIM35Q9UPQ4 Y_RNA.332-201ENST00000365271 113 ntBASIC4.52□□□□□ -1.69
TRIM35Q9UPQ4 MIR34C-201ENST00000384831 77 ntBASIC4.52□□□□□ -1.69
TRIM35Q9UPQ4 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
TRIM35Q9UPQ4 RN7SKP111-201ENST00000410349 271 ntBASIC4.52□□□□□ -1.69
TRIM35Q9UPQ4 RNU6-519P-201ENST00000410590 108 ntBASIC4.52□□□□□ -1.69
TRIM35Q9UPQ4 RNU6-448P-201ENST00000517052 107 ntBASIC4.52□□□□□ -1.69
TRIM35Q9UPQ4 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC4.52□□□□□ -1.69
TRIM35Q9UPQ4 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
TRIM35Q9UPQ4 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
TRIM35Q9UPQ4 AC096644.4-201ENST00000563417 2912 ntBASIC4.52□□□□□ -1.69
TRIM35Q9UPQ4 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
TRIM35Q9UPQ4 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.51□□□□□ -1.69
TRIM35Q9UPQ4 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
TRIM35Q9UPQ4 RNU1-33P-201ENST00000364249 162 ntBASIC4.51□□□□□ -1.69
TRIM35Q9UPQ4 RNU6-141P-201ENST00000410499 105 ntBASIC4.51□□□□□ -1.69
TRIM35Q9UPQ4 UBL5P3-201ENST00000475112 231 ntBASIC4.51□□□□□ -1.69
TRIM35Q9UPQ4 RN7SL504P-201ENST00000494496 287 ntBASIC4.51□□□□□ -1.69
TRIM35Q9UPQ4 RNU2-27P-201ENST00000516185 142 ntBASIC4.51□□□□□ -1.69
TRIM35Q9UPQ4 IGLV3-17-201ENST00000519099 244 ntBASIC4.51□□□□□ -1.69
TRIM35Q9UPQ4 MIR7851-201ENST00000610611 160 ntBASIC4.51□□□□□ -1.69
TRIM35Q9UPQ4 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
TRIM35Q9UPQ4 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
TRIM35Q9UPQ4 MIR340-201ENST00000362125 95 ntBASIC4.5□□□□□ -1.69
TRIM35Q9UPQ4 MIR208A-201ENST00000362287 71 ntBASIC4.5□□□□□ -1.69
TRIM35Q9UPQ4 SNORA25.6-201ENST00000364121 118 ntBASIC4.5□□□□□ -1.69
TRIM35Q9UPQ4 RNU6-296P-201ENST00000384608 107 ntBASIC4.5□□□□□ -1.69
TRIM35Q9UPQ4 RNU6-1307P-201ENST00000391012 103 ntBASIC4.5□□□□□ -1.69
TRIM35Q9UPQ4 AC007536.1-201ENST00000533382 349 ntBASIC4.5□□□□□ -1.69
TRIM35Q9UPQ4 AC020891.4-201ENST00000605745 93 ntBASIC4.5□□□□□ -1.69
TRIM35Q9UPQ4 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.5□□□□□ -1.69
TRIM35Q9UPQ4 CTSLP2-204ENST00000629029 392 ntBASIC4.5□□□□□ -1.69
TRIM35Q9UPQ4 MIR338-201ENST00000636369 67 ntBASIC4.5□□□□□ -1.69
TRIM35Q9UPQ4 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
TRIM35Q9UPQ4 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
TRIM35Q9UPQ4 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
TRIM35Q9UPQ4 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.5□□□□□ -1.69
TRIM35Q9UPQ4 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.49□□□□□ -1.69
TRIM35Q9UPQ4 MIR206-201ENST00000384872 86 ntBASIC4.49□□□□□ -1.69
TRIM35Q9UPQ4 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.49□□□□□ -1.69
TRIM35Q9UPQ4 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC4.49□□□□□ -1.69
TRIM35Q9UPQ4 AC087499.7-201ENST00000441958 109 ntBASIC4.49□□□□□ -1.69
TRIM35Q9UPQ4 RNU1-61P-201ENST00000516107 151 ntBASIC4.49□□□□□ -1.69
TRIM35Q9UPQ4 uc_338.25-201ENST00000613756 156 ntBASIC4.49□□□□□ -1.69
TRIM35Q9UPQ4 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
TRIM35Q9UPQ4 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.49□□□□□ -1.69
TRIM35Q9UPQ4 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
TRIM35Q9UPQ4 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
TRIM35Q9UPQ4 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
TRIM35Q9UPQ4 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
TRIM35Q9UPQ4 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
TRIM35Q9UPQ4 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
TRIM35Q9UPQ4 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
TRIM35Q9UPQ4 SNORA63.1-201ENST00000362493 131 ntBASIC4.48□□□□□ -1.69
TRIM35Q9UPQ4 Y_RNA.168-201ENST00000363740 102 ntBASIC4.48□□□□□ -1.69
TRIM35Q9UPQ4 MIR181B2-201ENST00000385004 89 ntBASIC4.48□□□□□ -1.69
TRIM35Q9UPQ4 MIR708-201ENST00000390708 88 ntBASIC4.48□□□□□ -1.69
TRIM35Q9UPQ4 AL357552.1-201ENST00000445254 415 ntBASIC4.48□□□□□ -1.69
TRIM35Q9UPQ4 RNU6-687P-201ENST00000516443 89 ntBASIC4.48□□□□□ -1.69
TRIM35Q9UPQ4 AC019176.2-201ENST00000611579 315 ntBASIC4.48□□□□□ -1.69
TRIM35Q9UPQ4 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC4.48□□□□□ -1.69
TRIM35Q9UPQ4 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
TRIM35Q9UPQ4 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.48□□□□□ -1.69
TRIM35Q9UPQ4 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
TRIM35Q9UPQ4 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
TRIM35Q9UPQ4 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TRIM35Q9UPQ4 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TRIM35Q9UPQ4 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.47□□□□□ -1.69
TRIM35Q9UPQ4 Y_RNA.173-201ENST00000363776 113 ntBASIC4.47□□□□□ -1.69
TRIM35Q9UPQ4 RNU6-471P-201ENST00000383944 106 ntBASIC4.47□□□□□ -1.69
TRIM35Q9UPQ4 RNU6-800P-201ENST00000384473 103 ntBASIC4.47□□□□□ -1.69
TRIM35Q9UPQ4 RNA5SP323-201ENST00000391094 133 ntBASIC4.47□□□□□ -1.69
TRIM35Q9UPQ4 RNA5SP482-201ENST00000391269 118 ntBASIC4.47□□□□□ -1.69
TRIM35Q9UPQ4 RNA5SP261-201ENST00000410536 106 ntBASIC4.47□□□□□ -1.69
TRIM35Q9UPQ4 SPINT5P-201ENST00000448174 155 ntBASIC4.47□□□□□ -1.69
TRIM35Q9UPQ4 snoU13.11-201ENST00000459219 104 ntBASIC4.47□□□□□ -1.69
TRIM35Q9UPQ4 AP000873.1-201ENST00000463987 400 ntBASIC4.47□□□□□ -1.69
TRIM35Q9UPQ4 PHBP14-201ENST00000512887 367 ntBASIC4.47□□□□□ -1.69
TRIM35Q9UPQ4 AC002076.2-201ENST00000617362 122 ntBASIC4.47□□□□□ -1.69
TRIM35Q9UPQ4 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TRIM35Q9UPQ4 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
TRIM35Q9UPQ4 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.69
TRIM35Q9UPQ4 CPD-202ENST00000543464 4007 ntTSL 2 BASIC4.46□□□□□ -1.7
TRIM35Q9UPQ4 RNA5SP50-201ENST00000363731 107 ntBASIC4.46□□□□□ -1.7
TRIM35Q9UPQ4 RNU6-480P-201ENST00000384332 107 ntBASIC4.46□□□□□ -1.7
TRIM35Q9UPQ4 SNORA26.6-201ENST00000391256 115 ntBASIC4.46□□□□□ -1.7
TRIM35Q9UPQ4 MIR1267-201ENST00000408723 78 ntBASIC4.46□□□□□ -1.7
TRIM35Q9UPQ4 AC091153.1-201ENST00000466297 402 ntBASIC4.46□□□□□ -1.7
TRIM35Q9UPQ4 RNU6-1041P-201ENST00000516254 102 ntBASIC4.46□□□□□ -1.7
TRIM35Q9UPQ4 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.46□□□□□ -1.7
TRIM35Q9UPQ4 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.46□□□□□ -1.7
TRIM35Q9UPQ4 AC012314.7-201ENST00000619693 93 ntBASIC4.46□□□□□ -1.7
TRIM35Q9UPQ4 SNORD3E-202ENST00000627253 216 ntBASIC4.46□□□□□ -1.7
TRIM35Q9UPQ4 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 189.6 ms