Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 SNORD72-201ENST00000390994 80 ntBASIC2.61□□□□□ -1.99
CHFRQ96EP1 RNA5SP496-201ENST00000391240 109 ntBASIC2.61□□□□□ -1.99
CHFRQ96EP1 RNU2-55P-201ENST00000411146 174 ntBASIC2.61□□□□□ -1.99
CHFRQ96EP1 AL161651.1-201ENST00000440882 223 ntBASIC2.61□□□□□ -1.99
CHFRQ96EP1 HMGN2P32-201ENST00000444648 269 ntBASIC2.61□□□□□ -1.99
CHFRQ96EP1 AL441985.1-201ENST00000457727 251 ntBASIC2.61□□□□□ -1.99
CHFRQ96EP1 AC107626.1-201ENST00000471084 183 ntBASIC2.61□□□□□ -1.99
CHFRQ96EP1 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.61□□□□□ -1.99
CHFRQ96EP1 AL049861.1-201ENST00000603130 150 ntBASIC2.61□□□□□ -1.99
CHFRQ96EP1 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.61□□□□□ -1.99
CHFRQ96EP1 ZNF271P-202ENST00000465539 1970 ntBASIC2.61□□□□□ -1.99
CHFRQ96EP1 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.61□□□□□ -1.99
CHFRQ96EP1 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
CHFRQ96EP1 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CHFRQ96EP1 RNU6-1107P-201ENST00000364817 104 ntBASIC2.6□□□□□ -1.99
CHFRQ96EP1 Y_RNA.328-201ENST00000365208 113 ntBASIC2.6□□□□□ -1.99
CHFRQ96EP1 MIR592-201ENST00000384959 97 ntBASIC2.6□□□□□ -1.99
CHFRQ96EP1 RNU6-1275P-201ENST00000391087 107 ntBASIC2.6□□□□□ -1.99
CHFRQ96EP1 MIR873-201ENST00000401120 77 ntBASIC2.6□□□□□ -1.99
CHFRQ96EP1 MIR1185-2-201ENST00000408687 86 ntBASIC2.6□□□□□ -1.99
CHFRQ96EP1 Z98742.3-201ENST00000418637 326 ntBASIC2.6□□□□□ -1.99
CHFRQ96EP1 RPL23AP54-201ENST00000495129 419 ntBASIC2.6□□□□□ -1.99
CHFRQ96EP1 AC105137.2-201ENST00000569073 466 ntBASIC2.6□□□□□ -1.99
CHFRQ96EP1 RPS15AP11-201ENST00000594193 385 ntBASIC2.6□□□□□ -1.99
CHFRQ96EP1 AC091152.3-201ENST00000604227 325 ntBASIC2.6□□□□□ -1.99
CHFRQ96EP1 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.6□□□□□ -1.99
CHFRQ96EP1 U4.3-201ENST00000621047 82 ntBASIC2.6□□□□□ -1.99
CHFRQ96EP1 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.6□□□□□ -1.99
CHFRQ96EP1 AC069528.2-201ENST00000624849 1991 ntBASIC2.6□□□□□ -1.99
CHFRQ96EP1 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CHFRQ96EP1 RNU6-766P-201ENST00000362478 107 ntBASIC2.59□□□□□ -1.99
CHFRQ96EP1 Y_RNA.52-201ENST00000362760 96 ntBASIC2.59□□□□□ -1.99
CHFRQ96EP1 RNU6-1305P-201ENST00000364353 104 ntBASIC2.59□□□□□ -1.99
CHFRQ96EP1 RNU4-41P-201ENST00000364426 143 ntBASIC2.59□□□□□ -1.99
CHFRQ96EP1 SNORA51.10-201ENST00000384418 136 ntBASIC2.59□□□□□ -1.99
CHFRQ96EP1 RNU6-748P-201ENST00000384648 107 ntBASIC2.59□□□□□ -1.99
CHFRQ96EP1 MIR218-1-201ENST00000384999 110 ntBASIC2.59□□□□□ -1.99
CHFRQ96EP1 EIF4EP4-201ENST00000424916 578 ntBASIC2.59□□□□□ -1.99
CHFRQ96EP1 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.59□□□□□ -1.99
CHFRQ96EP1 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.59□□□□□ -1.99
CHFRQ96EP1 RPL36AP21-201ENST00000490372 323 ntBASIC2.59□□□□□ -1.99
CHFRQ96EP1 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.59□□□□□ -1.99
CHFRQ96EP1 RNU6-1299P-201ENST00000516316 100 ntBASIC2.59□□□□□ -1.99
CHFRQ96EP1 PRELID2P1-201ENST00000552837 301 ntBASIC2.59□□□□□ -1.99
CHFRQ96EP1 AL022345.2-201ENST00000606307 135 ntBASIC2.59□□□□□ -1.99
CHFRQ96EP1 RNU6-91P-201ENST00000607774 107 ntBASIC2.59□□□□□ -1.99
CHFRQ96EP1 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CHFRQ96EP1 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.59□□□□□ -2
CHFRQ96EP1 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.58□□□□□ -2
CHFRQ96EP1 AL356292.1-201ENST00000283110 373 ntBASIC2.58□□□□□ -2
CHFRQ96EP1 SNORA27.1-201ENST00000362604 124 ntBASIC2.58□□□□□ -2
CHFRQ96EP1 RNU6-1010P-201ENST00000362757 107 ntBASIC2.58□□□□□ -2
CHFRQ96EP1 Y_RNA.634-201ENST00000364811 113 ntBASIC2.58□□□□□ -2
CHFRQ96EP1 SNORD18B-201ENST00000365659 72 ntBASIC2.58□□□□□ -2
CHFRQ96EP1 Y_RNA.549-201ENST00000384657 102 ntBASIC2.58□□□□□ -2
CHFRQ96EP1 SNORA12-201ENST00000391162 147 ntBASIC2.58□□□□□ -2
CHFRQ96EP1 RNU4-53P-201ENST00000410828 140 ntBASIC2.58□□□□□ -2
CHFRQ96EP1 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.58□□□□□ -2
CHFRQ96EP1 RPS29P21-201ENST00000496272 170 ntBASIC2.58□□□□□ -2
CHFRQ96EP1 SNORA31.15-201ENST00000516771 132 ntBASIC2.58□□□□□ -2
CHFRQ96EP1 AC097639.2-201ENST00000603159 172 ntBASIC2.58□□□□□ -2
CHFRQ96EP1 AC005972.2-201ENST00000604690 348 ntBASIC2.58□□□□□ -2
CHFRQ96EP1 AC062037.1-201ENST00000605302 128 ntBASIC2.58□□□□□ -2
CHFRQ96EP1 AC009831.4-201ENST00000620744 325 ntBASIC2.58□□□□□ -2
CHFRQ96EP1 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.58□□□□□ -2
CHFRQ96EP1 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.58□□□□□ -2
CHFRQ96EP1 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.58□□□□□ -2
CHFRQ96EP1 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CHFRQ96EP1 Y_RNA.85-201ENST00000363014 111 ntBASIC2.57□□□□□ -2
CHFRQ96EP1 MIR488-201ENST00000365739 83 ntBASIC2.57□□□□□ -2
CHFRQ96EP1 RNU6-1080P-201ENST00000383982 107 ntBASIC2.57□□□□□ -2
CHFRQ96EP1 RNU6-756P-201ENST00000383997 107 ntBASIC2.57□□□□□ -2
CHFRQ96EP1 MIR586-201ENST00000385035 97 ntBASIC2.57□□□□□ -2
CHFRQ96EP1 RNU6-220P-201ENST00000390919 107 ntBASIC2.57□□□□□ -2
CHFRQ96EP1 MIR891A-201ENST00000401237 79 ntBASIC2.57□□□□□ -2
CHFRQ96EP1 RPS26P55-201ENST00000471178 356 ntBASIC2.57□□□□□ -2
CHFRQ96EP1 RN7SL636P-201ENST00000497504 294 ntBASIC2.57□□□□□ -2
CHFRQ96EP1 RNA5SP153-201ENST00000516498 76 ntBASIC2.57□□□□□ -2
CHFRQ96EP1 RNU6-63P-201ENST00000516690 95 ntBASIC2.57□□□□□ -2
CHFRQ96EP1 SCARNA3-201ENST00000517097 143 ntBASIC2.57□□□□□ -2
CHFRQ96EP1 AP003327.1-201ENST00000529684 127 ntBASIC2.57□□□□□ -2
CHFRQ96EP1 MIR3670-2-201ENST00000582974 65 ntBASIC2.57□□□□□ -2
CHFRQ96EP1 MIR3670-1-201ENST00000584160 65 ntBASIC2.57□□□□□ -2
CHFRQ96EP1 MIR3670-3-201ENST00000584855 65 ntBASIC2.57□□□□□ -2
CHFRQ96EP1 MIR3670-4-201ENST00000612260 65 ntBASIC2.57□□□□□ -2
CHFRQ96EP1 AL159152.1-201ENST00000635019 2587 ntBASIC2.56□□□□□ -2
CHFRQ96EP1 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
CHFRQ96EP1 Y_RNA.163-201ENST00000363702 113 ntBASIC2.56□□□□□ -2
CHFRQ96EP1 RNA5SP173-201ENST00000364857 136 ntBASIC2.56□□□□□ -2
CHFRQ96EP1 Y_RNA.558-201ENST00000384685 113 ntBASIC2.56□□□□□ -2
CHFRQ96EP1 MIR1263-201ENST00000408324 86 ntBASIC2.56□□□□□ -2
CHFRQ96EP1 RNU2-32P-201ENST00000411193 191 ntBASIC2.56□□□□□ -2
CHFRQ96EP1 snoU13.15-201ENST00000459407 104 ntBASIC2.56□□□□□ -2
CHFRQ96EP1 HMGN2P9-201ENST00000476875 229 ntBASIC2.56□□□□□ -2
CHFRQ96EP1 SNORD77.4-201ENST00000516158 81 ntBASIC2.56□□□□□ -2
CHFRQ96EP1 RNU6-412P-201ENST00000516434 106 ntBASIC2.56□□□□□ -2
CHFRQ96EP1 RNU6-638P-201ENST00000516582 104 ntBASIC2.56□□□□□ -2
CHFRQ96EP1 RNU7-116P-201ENST00000516940 62 ntBASIC2.56□□□□□ -2
CHFRQ96EP1 HSPE1P18-201ENST00000517602 280 ntBASIC2.56□□□□□ -2
CHFRQ96EP1 AC004486.1-201ENST00000546846 233 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 272.3 ms