Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 AC006989.1-201ENST00000427212 131 ntBASIC3.39□□□□□ -1.87
CCDC116Q8IYX3 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC116Q8IYX3 AC023141.11-201ENST00000508864 202 ntBASIC3.39□□□□□ -1.87
CCDC116Q8IYX3 SNORA31.4-201ENST00000516049 129 ntBASIC3.39□□□□□ -1.87
CCDC116Q8IYX3 RNU6-65P-201ENST00000516332 98 ntBASIC3.39□□□□□ -1.87
CCDC116Q8IYX3 MIR4777-201ENST00000583710 86 ntBASIC3.39□□□□□ -1.87
CCDC116Q8IYX3 AC021613.1-201ENST00000623880 111 ntBASIC3.39□□□□□ -1.87
CCDC116Q8IYX3 AC091304.10-201ENST00000641554 121 ntBASIC3.39□□□□□ -1.87
CCDC116Q8IYX3 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
CCDC116Q8IYX3 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
CCDC116Q8IYX3 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
CCDC116Q8IYX3 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC116Q8IYX3 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
CCDC116Q8IYX3 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.38□□□□□ -1.87
CCDC116Q8IYX3 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.38□□□□□ -1.87
CCDC116Q8IYX3 Y_RNA.241-201ENST00000364470 117 ntBASIC3.38□□□□□ -1.87
CCDC116Q8IYX3 SNORD45B-201ENST00000364617 72 ntBASIC3.38□□□□□ -1.87
CCDC116Q8IYX3 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC116Q8IYX3 SNORD38C-201ENST00000384381 69 ntBASIC3.38□□□□□ -1.87
CCDC116Q8IYX3 SNORD116-22-201ENST00000384430 92 ntBASIC3.38□□□□□ -1.87
CCDC116Q8IYX3 MIR561-201ENST00000385216 97 ntBASIC3.38□□□□□ -1.87
CCDC116Q8IYX3 RNU6ATAC-201ENST00000408749 126 ntBASIC3.38□□□□□ -1.87
CCDC116Q8IYX3 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC116Q8IYX3 AL353813.1-201ENST00000440700 253 ntBASIC3.38□□□□□ -1.87
CCDC116Q8IYX3 RN7SL542P-201ENST00000467147 294 ntBASIC3.38□□□□□ -1.87
CCDC116Q8IYX3 SEM1P1-201ENST00000506694 209 ntBASIC3.38□□□□□ -1.87
CCDC116Q8IYX3 RNU6-998P-201ENST00000515894 101 ntBASIC3.38□□□□□ -1.87
CCDC116Q8IYX3 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC116Q8IYX3 MIR5588-201ENST00000581890 63 ntBASIC3.38□□□□□ -1.87
CCDC116Q8IYX3 YPEL5P2-201ENST00000605553 359 ntBASIC3.38□□□□□ -1.87
CCDC116Q8IYX3 uc_338.25-201ENST00000613756 156 ntBASIC3.38□□□□□ -1.87
CCDC116Q8IYX3 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC116Q8IYX3 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC116Q8IYX3 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC116Q8IYX3 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.37□□□□□ -1.87
CCDC116Q8IYX3 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC116Q8IYX3 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC116Q8IYX3 Y_RNA.96-201ENST00000363092 109 ntBASIC3.37□□□□□ -1.87
CCDC116Q8IYX3 Y_RNA.99-201ENST00000363138 105 ntBASIC3.37□□□□□ -1.87
CCDC116Q8IYX3 RNU6-1125P-201ENST00000363601 107 ntBASIC3.37□□□□□ -1.87
CCDC116Q8IYX3 Y_RNA.190-201ENST00000363964 101 ntBASIC3.37□□□□□ -1.87
CCDC116Q8IYX3 RNU6-979P-201ENST00000383896 107 ntBASIC3.37□□□□□ -1.87
CCDC116Q8IYX3 RNU6-679P-201ENST00000391003 106 ntBASIC3.37□□□□□ -1.87
CCDC116Q8IYX3 RNU6-279P-201ENST00000391297 101 ntBASIC3.37□□□□□ -1.87
CCDC116Q8IYX3 CYCSP19-201ENST00000411715 316 ntBASIC3.37□□□□□ -1.87
CCDC116Q8IYX3 AC006539.3-201ENST00000454258 129 ntBASIC3.37□□□□□ -1.87
CCDC116Q8IYX3 RNU7-96P-201ENST00000459535 64 ntBASIC3.37□□□□□ -1.87
CCDC116Q8IYX3 AC018868.1-201ENST00000491307 315 ntBASIC3.37□□□□□ -1.87
CCDC116Q8IYX3 MIR4738-201ENST00000579134 87 ntBASIC3.37□□□□□ -1.87
CCDC116Q8IYX3 MIR7153-201ENST00000637758 57 ntBASIC3.37□□□□□ -1.87
CCDC116Q8IYX3 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC116Q8IYX3 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC116Q8IYX3 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC116Q8IYX3 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC116Q8IYX3 SNORA68.1-201ENST00000364537 132 ntBASIC3.36□□□□□ -1.87
CCDC116Q8IYX3 Y_RNA.299-201ENST00000364973 94 ntBASIC3.36□□□□□ -1.87
CCDC116Q8IYX3 CD24P4-201ENST00000382840 243 ntBASIC3.36□□□□□ -1.87
CCDC116Q8IYX3 SNORA7.5-201ENST00000410672 110 ntBASIC3.36□□□□□ -1.87
CCDC116Q8IYX3 POLR2J4-204ENST00000418424 324 ntBASIC3.36□□□□□ -1.87
CCDC116Q8IYX3 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC116Q8IYX3 AC245047.3-201ENST00000429428 127 ntBASIC3.36□□□□□ -1.87
CCDC116Q8IYX3 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.36□□□□□ -1.87
CCDC116Q8IYX3 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC3.36□□□□□ -1.87
CCDC116Q8IYX3 RN7SL297P-201ENST00000483161 293 ntBASIC3.36□□□□□ -1.87
CCDC116Q8IYX3 RNU2-27P-201ENST00000516185 142 ntBASIC3.36□□□□□ -1.87
CCDC116Q8IYX3 RNU7-28P-201ENST00000516759 62 ntBASIC3.36□□□□□ -1.87
CCDC116Q8IYX3 RNU6-579P-201ENST00000516879 102 ntBASIC3.36□□□□□ -1.87
CCDC116Q8IYX3 AL121772.2-201ENST00000614331 297 ntBASIC3.36□□□□□ -1.87
CCDC116Q8IYX3 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.36□□□□□ -1.87
CCDC116Q8IYX3 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
CCDC116Q8IYX3 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC116Q8IYX3 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC116Q8IYX3 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.35□□□□□ -1.87
CCDC116Q8IYX3 MIR208A-201ENST00000362287 71 ntBASIC3.35□□□□□ -1.87
CCDC116Q8IYX3 SNORD9-201ENST00000362566 104 ntBASIC3.35□□□□□ -1.87
CCDC116Q8IYX3 RNU6-862P-201ENST00000362804 105 ntBASIC3.35□□□□□ -1.87
CCDC116Q8IYX3 SNORD115-35-201ENST00000365122 82 ntBASIC3.35□□□□□ -1.87
CCDC116Q8IYX3 MIR200C-201ENST00000384980 68 ntBASIC3.35□□□□□ -1.87
CCDC116Q8IYX3 MIR483-201ENST00000385070 76 ntBASIC3.35□□□□□ -1.87
CCDC116Q8IYX3 RNU4-69P-201ENST00000410677 143 ntBASIC3.35□□□□□ -1.87
CCDC116Q8IYX3 AL606517.2-201ENST00000442855 241 ntBASIC3.35□□□□□ -1.87
CCDC116Q8IYX3 RNU2-11P-201ENST00000459191 187 ntBASIC3.35□□□□□ -1.87
CCDC116Q8IYX3 RPS27P29-201ENST00000463110 252 ntBASIC3.35□□□□□ -1.87
CCDC116Q8IYX3 AC114811.1-201ENST00000507207 168 ntBASIC3.35□□□□□ -1.87
CCDC116Q8IYX3 SNORA70.18-201ENST00000516696 98 ntBASIC3.35□□□□□ -1.87
CCDC116Q8IYX3 RNU6-267P-201ENST00000516714 103 ntBASIC3.35□□□□□ -1.87
CCDC116Q8IYX3 SNORA31.26-201ENST00000517250 137 ntBASIC3.35□□□□□ -1.87
CCDC116Q8IYX3 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC116Q8IYX3 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC116Q8IYX3 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC116Q8IYX3 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
CCDC116Q8IYX3 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.35□□□□□ -1.87
CCDC116Q8IYX3 AC092881.1-201ENST00000638218 2733 ntBASIC3.35□□□□□ -1.87
CCDC116Q8IYX3 AC073346.2-201ENST00000624724 2058 ntBASIC3.34□□□□□ -1.87
CCDC116Q8IYX3 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CCDC116Q8IYX3 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CCDC116Q8IYX3 Y_RNA.95-201ENST00000363079 95 ntBASIC3.34□□□□□ -1.87
CCDC116Q8IYX3 SNORA25.6-201ENST00000364121 118 ntBASIC3.34□□□□□ -1.87
CCDC116Q8IYX3 RNU6-1296P-201ENST00000383879 107 ntBASIC3.34□□□□□ -1.87
CCDC116Q8IYX3 RNU6-160P-201ENST00000384591 107 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 167.5 ms