Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
TRIM50Q86XT4 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.36□□□□□ -1.87
TRIM50Q86XT4 RNU6-1084P-201ENST00000362498 107 ntBASIC3.36□□□□□ -1.87
TRIM50Q86XT4 SNORD14E-201ENST00000364009 85 ntBASIC3.36□□□□□ -1.87
TRIM50Q86XT4 MIR627-201ENST00000384979 97 ntBASIC3.36□□□□□ -1.87
TRIM50Q86XT4 SNORA26.7-201ENST00000391288 122 ntBASIC3.36□□□□□ -1.87
TRIM50Q86XT4 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.36□□□□□ -1.87
TRIM50Q86XT4 AC099677.2-201ENST00000436385 175 ntBASIC3.36□□□□□ -1.87
TRIM50Q86XT4 AL135938.1-201ENST00000443141 297 ntBASIC3.36□□□□□ -1.87
TRIM50Q86XT4 MIR3613-201ENST00000579844 87 ntBASIC3.36□□□□□ -1.87
TRIM50Q86XT4 AC007318.2-201ENST00000620999 243 ntBASIC3.36□□□□□ -1.87
TRIM50Q86XT4 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC3.36□□□□□ -1.87
TRIM50Q86XT4 MIR148B-201ENST00000362252 99 ntBASIC3.35□□□□□ -1.87
TRIM50Q86XT4 SNORA5B-201ENST00000363786 132 ntBASIC3.35□□□□□ -1.87
TRIM50Q86XT4 MIR548O-201ENST00000408583 114 ntBASIC3.35□□□□□ -1.87
TRIM50Q86XT4 AC007064.1-201ENST00000412238 351 ntBASIC3.35□□□□□ -1.87
TRIM50Q86XT4 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3.35□□□□□ -1.87
TRIM50Q86XT4 AL109933.2-201ENST00000452651 260 ntBASIC3.35□□□□□ -1.87
TRIM50Q86XT4 AC006483.1-201ENST00000487308 313 ntBASIC3.35□□□□□ -1.87
TRIM50Q86XT4 RN7SL20P-201ENST00000488827 297 ntBASIC3.35□□□□□ -1.87
TRIM50Q86XT4 RPL23AP94-201ENST00000512518 302 ntBASIC3.35□□□□□ -1.87
TRIM50Q86XT4 MIR3169-201ENST00000578032 83 ntBASIC3.35□□□□□ -1.87
TRIM50Q86XT4 CTSLP2-204ENST00000629029 392 ntBASIC3.35□□□□□ -1.87
TRIM50Q86XT4 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
TRIM50Q86XT4 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
TRIM50Q86XT4 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
TRIM50Q86XT4 RNA5SP383-201ENST00000362934 120 ntBASIC3.34□□□□□ -1.87
TRIM50Q86XT4 RNU6-442P-201ENST00000383968 104 ntBASIC3.34□□□□□ -1.87
TRIM50Q86XT4 RNU6-147P-201ENST00000383983 107 ntBASIC3.34□□□□□ -1.87
TRIM50Q86XT4 RNU6-880P-201ENST00000384526 107 ntBASIC3.34□□□□□ -1.87
TRIM50Q86XT4 RN7SKP284-201ENST00000411002 343 ntBASIC3.34□□□□□ -1.87
TRIM50Q86XT4 RPL32P35-201ENST00000415214 394 ntBASIC3.34□□□□□ -1.87
TRIM50Q86XT4 AC104389.3-201ENST00000445629 235 ntBASIC3.34□□□□□ -1.87
TRIM50Q86XT4 AC104027.1-201ENST00000521887 300 ntBASIC3.34□□□□□ -1.87
TRIM50Q86XT4 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC3.34□□□□□ -1.87
TRIM50Q86XT4 MIR376A2-201ENST00000636782 80 ntBASIC3.34□□□□□ -1.87
TRIM50Q86XT4 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.88
TRIM50Q86XT4 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
TRIM50Q86XT4 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.33□□□□□ -1.88
TRIM50Q86XT4 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.33□□□□□ -1.88
TRIM50Q86XT4 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
TRIM50Q86XT4 AC245047.3-201ENST00000429428 127 ntBASIC3.33□□□□□ -1.88
TRIM50Q86XT4 AL606517.2-201ENST00000442855 241 ntBASIC3.33□□□□□ -1.88
TRIM50Q86XT4 RN7SL297P-201ENST00000483161 293 ntBASIC3.33□□□□□ -1.88
TRIM50Q86XT4 RNA5SP217-201ENST00000515959 91 ntBASIC3.33□□□□□ -1.88
TRIM50Q86XT4 SCARNA15-202ENST00000516881 127 ntBASIC3.33□□□□□ -1.88
TRIM50Q86XT4 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
TRIM50Q86XT4 AC026271.5-201ENST00000577873 130 ntBASIC3.33□□□□□ -1.88
TRIM50Q86XT4 MIR4506-201ENST00000584693 77 ntBASIC3.33□□□□□ -1.88
TRIM50Q86XT4 AL449363.1-201ENST00000617815 186 ntBASIC3.33□□□□□ -1.88
TRIM50Q86XT4 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TRIM50Q86XT4 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.33□□□□□ -1.88
TRIM50Q86XT4 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TRIM50Q86XT4 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
TRIM50Q86XT4 AC008555.8-201ENST00000623602 2168 ntBASIC3.32□□□□□ -1.88
TRIM50Q86XT4 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TRIM50Q86XT4 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TRIM50Q86XT4 SNORD56.3-201ENST00000363507 71 ntBASIC3.32□□□□□ -1.88
TRIM50Q86XT4 Y_RNA.265-201ENST00000364677 108 ntBASIC3.32□□□□□ -1.88
TRIM50Q86XT4 snoU2-30.1-201ENST00000365012 70 ntBASIC3.32□□□□□ -1.88
TRIM50Q86XT4 Y_RNA.528-201ENST00000384575 108 ntBASIC3.32□□□□□ -1.88
TRIM50Q86XT4 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.32□□□□□ -1.88
TRIM50Q86XT4 RN7SKP132-201ENST00000516001 208 ntBASIC3.32□□□□□ -1.88
TRIM50Q86XT4 RNU7-25P-201ENST00000516544 62 ntBASIC3.32□□□□□ -1.88
TRIM50Q86XT4 MIR5197-201ENST00000583721 112 ntBASIC3.32□□□□□ -1.88
TRIM50Q86XT4 AC022202.1-201ENST00000613515 211 ntBASIC3.32□□□□□ -1.88
TRIM50Q86XT4 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.32□□□□□ -1.88
TRIM50Q86XT4 Y_RNA.366-201ENST00000365540 102 ntBASIC3.31□□□□□ -1.88
TRIM50Q86XT4 Y_RNA.500-201ENST00000384466 111 ntBASIC3.31□□□□□ -1.88
TRIM50Q86XT4 RNA5SP109-201ENST00000391010 116 ntBASIC3.31□□□□□ -1.88
TRIM50Q86XT4 AC092427.1-202ENST00000430569 476 ntBASIC3.31□□□□□ -1.88
TRIM50Q86XT4 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.31□□□□□ -1.88
TRIM50Q86XT4 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.31□□□□□ -1.88
TRIM50Q86XT4 GTF3AP2-201ENST00000557014 266 ntBASIC3.31□□□□□ -1.88
TRIM50Q86XT4 MIR4679-2-201ENST00000578358 77 ntBASIC3.31□□□□□ -1.88
TRIM50Q86XT4 MIR4672-201ENST00000583126 81 ntBASIC3.31□□□□□ -1.88
TRIM50Q86XT4 MIR4762-201ENST00000585261 75 ntBASIC3.31□□□□□ -1.88
TRIM50Q86XT4 AC134878.1-201ENST00000619901 243 ntBASIC3.31□□□□□ -1.88
TRIM50Q86XT4 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.31□□□□□ -1.88
TRIM50Q86XT4 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TRIM50Q86XT4 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
TRIM50Q86XT4 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
TRIM50Q86XT4 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
TRIM50Q86XT4 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
TRIM50Q86XT4 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TRIM50Q86XT4 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
TRIM50Q86XT4 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
TRIM50Q86XT4 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
TRIM50Q86XT4 U8.5-201ENST00000364528 136 ntBASIC3.3□□□□□ -1.88
TRIM50Q86XT4 SNORA11.4-201ENST00000408823 129 ntBASIC3.3□□□□□ -1.88
TRIM50Q86XT4 RN7SKP123-201ENST00000410732 291 ntBASIC3.3□□□□□ -1.88
TRIM50Q86XT4 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3.3□□□□□ -1.88
TRIM50Q86XT4 CALM2P4-201ENST00000430810 426 ntBASIC3.3□□□□□ -1.88
TRIM50Q86XT4 RNA5SP356-201ENST00000515972 94 ntBASIC3.3□□□□□ -1.88
TRIM50Q86XT4 SNORD45.4-201ENST00000516629 73 ntBASIC3.3□□□□□ -1.88
TRIM50Q86XT4 RNU6-113P-201ENST00000516653 101 ntBASIC3.3□□□□□ -1.88
TRIM50Q86XT4 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.3□□□□□ -1.88
TRIM50Q86XT4 AC006023.1-201ENST00000603944 259 ntBASIC3.3□□□□□ -1.88
TRIM50Q86XT4 AC006441.5-201ENST00000612680 209 ntBASIC3.3□□□□□ -1.88
TRIM50Q86XT4 AL137067.1-201ENST00000615933 120 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 432.3 ms