Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 RNU6-106P-201ENST00000384405 107 ntBASIC2.84□□□□□ -1.95
CNKSR3Q6P9H4 MIR562-201ENST00000384894 95 ntBASIC2.84□□□□□ -1.95
CNKSR3Q6P9H4 MIR27B-201ENST00000385129 97 ntBASIC2.84□□□□□ -1.95
CNKSR3Q6P9H4 MIR624-201ENST00000385217 97 ntBASIC2.84□□□□□ -1.95
CNKSR3Q6P9H4 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.84□□□□□ -1.95
CNKSR3Q6P9H4 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.84□□□□□ -1.95
CNKSR3Q6P9H4 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.84□□□□□ -1.95
CNKSR3Q6P9H4 snoU13.15-201ENST00000459407 104 ntBASIC2.84□□□□□ -1.95
CNKSR3Q6P9H4 RPS29P24-201ENST00000486345 171 ntBASIC2.84□□□□□ -1.95
CNKSR3Q6P9H4 RNA5SP320-201ENST00000516263 124 ntBASIC2.84□□□□□ -1.95
CNKSR3Q6P9H4 AC068657.1-201ENST00000520807 306 ntBASIC2.84□□□□□ -1.95
CNKSR3Q6P9H4 U4.3-201ENST00000621047 82 ntBASIC2.84□□□□□ -1.95
CNKSR3Q6P9H4 AC006435.5-201ENST00000624486 112 ntBASIC2.84□□□□□ -1.95
CNKSR3Q6P9H4 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CNKSR3Q6P9H4 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.96
CNKSR3Q6P9H4 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
CNKSR3Q6P9H4 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.83□□□□□ -1.96
CNKSR3Q6P9H4 RNA5SP289-201ENST00000362332 137 ntBASIC2.83□□□□□ -1.96
CNKSR3Q6P9H4 RNU1-72P-201ENST00000362976 153 ntBASIC2.83□□□□□ -1.96
CNKSR3Q6P9H4 RNU1-22P-201ENST00000363334 158 ntBASIC2.83□□□□□ -1.96
CNKSR3Q6P9H4 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
CNKSR3Q6P9H4 SNORA26.7-201ENST00000391288 122 ntBASIC2.83□□□□□ -1.96
CNKSR3Q6P9H4 RNY4P30-201ENST00000410216 95 ntBASIC2.83□□□□□ -1.96
CNKSR3Q6P9H4 RNU2-63P-201ENST00000410792 194 ntBASIC2.83□□□□□ -1.96
CNKSR3Q6P9H4 RNU4-53P-201ENST00000410828 140 ntBASIC2.83□□□□□ -1.96
CNKSR3Q6P9H4 CYP2C59P-201ENST00000457790 269 ntBASIC2.83□□□□□ -1.96
CNKSR3Q6P9H4 RPS27P22-201ENST00000478056 241 ntBASIC2.83□□□□□ -1.96
CNKSR3Q6P9H4 RNU6-948P-201ENST00000516374 107 ntBASIC2.83□□□□□ -1.96
CNKSR3Q6P9H4 Y_RNA.677-201ENST00000516401 85 ntBASIC2.83□□□□□ -1.96
CNKSR3Q6P9H4 SNORA18.4-201ENST00000516440 124 ntBASIC2.83□□□□□ -1.96
CNKSR3Q6P9H4 RNU7-149P-201ENST00000516739 59 ntBASIC2.83□□□□□ -1.96
CNKSR3Q6P9H4 AC245166.1-201ENST00000521012 253 ntBASIC2.83□□□□□ -1.96
CNKSR3Q6P9H4 MIR4635-201ENST00000583759 79 ntBASIC2.83□□□□□ -1.96
CNKSR3Q6P9H4 AL365205.2-201ENST00000594586 68 ntBASIC2.83□□□□□ -1.96
CNKSR3Q6P9H4 Pinc.1-201ENST00000616452 154 ntBASIC2.83□□□□□ -1.96
CNKSR3Q6P9H4 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CNKSR3Q6P9H4 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
CNKSR3Q6P9H4 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
CNKSR3Q6P9H4 RNU6-1138P-201ENST00000365359 106 ntBASIC2.82□□□□□ -1.96
CNKSR3Q6P9H4 RNU6-554P-201ENST00000410466 106 ntBASIC2.82□□□□□ -1.96
CNKSR3Q6P9H4 RNA5SP127-201ENST00000411051 133 ntBASIC2.82□□□□□ -1.96
CNKSR3Q6P9H4 Z98742.3-201ENST00000418637 326 ntBASIC2.82□□□□□ -1.96
CNKSR3Q6P9H4 RPS29P21-201ENST00000496272 170 ntBASIC2.82□□□□□ -1.96
CNKSR3Q6P9H4 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.82□□□□□ -1.96
CNKSR3Q6P9H4 SNORA9.3-201ENST00000516383 129 ntBASIC2.82□□□□□ -1.96
CNKSR3Q6P9H4 RNU1-104P-201ENST00000517280 175 ntBASIC2.82□□□□□ -1.96
CNKSR3Q6P9H4 AC018630.3-201ENST00000542637 96 ntBASIC2.82□□□□□ -1.96
CNKSR3Q6P9H4 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.82□□□□□ -1.96
CNKSR3Q6P9H4 MIR4524B-201ENST00000581569 115 ntBASIC2.82□□□□□ -1.96
CNKSR3Q6P9H4 MIR2681-201ENST00000581814 105 ntBASIC2.82□□□□□ -1.96
CNKSR3Q6P9H4 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.82□□□□□ -1.96
CNKSR3Q6P9H4 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.82□□□□□ -1.96
CNKSR3Q6P9H4 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
CNKSR3Q6P9H4 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CNKSR3Q6P9H4 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.81□□□□□ -1.96
CNKSR3Q6P9H4 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
CNKSR3Q6P9H4 RNU6-1240P-201ENST00000365155 104 ntBASIC2.81□□□□□ -1.96
CNKSR3Q6P9H4 RNU6-1235P-201ENST00000384559 107 ntBASIC2.81□□□□□ -1.96
CNKSR3Q6P9H4 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.81□□□□□ -1.96
CNKSR3Q6P9H4 RNA5SP425-201ENST00000410336 112 ntBASIC2.81□□□□□ -1.96
CNKSR3Q6P9H4 RNA5SP492-201ENST00000411330 114 ntBASIC2.81□□□□□ -1.96
CNKSR3Q6P9H4 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.81□□□□□ -1.96
CNKSR3Q6P9H4 AL021397.1-201ENST00000451806 248 ntBASIC2.81□□□□□ -1.96
CNKSR3Q6P9H4 RNU6-498P-201ENST00000459468 107 ntBASIC2.81□□□□□ -1.96
CNKSR3Q6P9H4 AC097462.1-201ENST00000514125 324 ntBASIC2.81□□□□□ -1.96
CNKSR3Q6P9H4 RNU6-586P-201ENST00000517265 104 ntBASIC2.81□□□□□ -1.96
CNKSR3Q6P9H4 AC007536.1-201ENST00000533382 349 ntBASIC2.81□□□□□ -1.96
CNKSR3Q6P9H4 AC011604.1-201ENST00000545978 196 ntBASIC2.81□□□□□ -1.96
CNKSR3Q6P9H4 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.81□□□□□ -1.96
CNKSR3Q6P9H4 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.81□□□□□ -1.96
CNKSR3Q6P9H4 Y_RNA.281-201ENST00000364774 94 ntBASIC2.8□□□□□ -1.96
CNKSR3Q6P9H4 SNORA1-201ENST00000384107 130 ntBASIC2.8□□□□□ -1.96
CNKSR3Q6P9H4 RNU6-905P-201ENST00000384434 107 ntBASIC2.8□□□□□ -1.96
CNKSR3Q6P9H4 MIR1263-201ENST00000408324 86 ntBASIC2.8□□□□□ -1.96
CNKSR3Q6P9H4 RN7SKP123-201ENST00000410732 291 ntBASIC2.8□□□□□ -1.96
CNKSR3Q6P9H4 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.8□□□□□ -1.96
CNKSR3Q6P9H4 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.8□□□□□ -1.96
CNKSR3Q6P9H4 AL161788.1-201ENST00000441805 169 ntBASIC2.8□□□□□ -1.96
CNKSR3Q6P9H4 AC104389.3-201ENST00000445629 235 ntBASIC2.8□□□□□ -1.96
CNKSR3Q6P9H4 AC023449.1-201ENST00000454464 154 ntBASIC2.8□□□□□ -1.96
CNKSR3Q6P9H4 OR9P1P-201ENST00000496431 281 ntBASIC2.8□□□□□ -1.96
CNKSR3Q6P9H4 RNA5SP236-201ENST00000516169 116 ntBASIC2.8□□□□□ -1.96
CNKSR3Q6P9H4 RNU6-844P-201ENST00000517175 102 ntBASIC2.8□□□□□ -1.96
CNKSR3Q6P9H4 RNU6-537P-201ENST00000517277 103 ntBASIC2.8□□□□□ -1.96
CNKSR3Q6P9H4 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
CNKSR3Q6P9H4 MIR4769-201ENST00000584126 77 ntBASIC2.8□□□□□ -1.96
CNKSR3Q6P9H4 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
CNKSR3Q6P9H4 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.8□□□□□ -1.96
CNKSR3Q6P9H4 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.8□□□□□ -1.96
CNKSR3Q6P9H4 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
CNKSR3Q6P9H4 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
CNKSR3Q6P9H4 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CNKSR3Q6P9H4 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
CNKSR3Q6P9H4 SNORA26-201ENST00000391286 122 ntBASIC2.79□□□□□ -1.96
CNKSR3Q6P9H4 AC008134.1-201ENST00000420943 193 ntBASIC2.79□□□□□ -1.96
CNKSR3Q6P9H4 AF228730.3-201ENST00000436691 102 ntBASIC2.79□□□□□ -1.96
CNKSR3Q6P9H4 RN7SL75P-201ENST00000461926 281 ntBASIC2.79□□□□□ -1.96
CNKSR3Q6P9H4 RNU7-172P-201ENST00000517125 64 ntBASIC2.79□□□□□ -1.96
CNKSR3Q6P9H4 IGKV3-31-201ENST00000523109 329 ntBASIC2.79□□□□□ -1.96
CNKSR3Q6P9H4 MIR3129-201ENST00000581095 76 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 215.2 ms