Protein–RNA interactions for Protein: Q5TA78

LCE4A, Late cornified envelope protein 4A, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE4AQ5TA78 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC1.66□□□□□ -2.14
LCE4AQ5TA78 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC1.66□□□□□ -2.14
LCE4AQ5TA78 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC1.66□□□□□ -2.14
LCE4AQ5TA78 DMD-222ENST00000474231 5209 ntTSL 5 BASIC1.66□□□□□ -2.14
LCE4AQ5TA78 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC1.66□□□□□ -2.14
LCE4AQ5TA78 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
LCE4AQ5TA78 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
LCE4AQ5TA78 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC1.66□□□□□ -2.14
LCE4AQ5TA78 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
LCE4AQ5TA78 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
LCE4AQ5TA78 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC1.66□□□□□ -2.14
LCE4AQ5TA78 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC1.66□□□□□ -2.14
LCE4AQ5TA78 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
LCE4AQ5TA78 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC1.66□□□□□ -2.14
LCE4AQ5TA78 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
LCE4AQ5TA78 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC1.66□□□□□ -2.14
LCE4AQ5TA78 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
LCE4AQ5TA78 Y_RNA.282-201ENST00000364793 102 ntBASIC1.66□□□□□ -2.14
LCE4AQ5TA78 SNORA16A-201ENST00000384342 137 ntBASIC1.66□□□□□ -2.14
LCE4AQ5TA78 SNORA70C-201ENST00000384538 135 ntBASIC1.66□□□□□ -2.14
LCE4AQ5TA78 MIR519E-201ENST00000385075 84 ntBASIC1.66□□□□□ -2.14
LCE4AQ5TA78 RNU6-220P-201ENST00000390919 107 ntBASIC1.66□□□□□ -2.14
LCE4AQ5TA78 RNU6-1246P-201ENST00000391064 107 ntBASIC1.66□□□□□ -2.14
LCE4AQ5TA78 SNORA67.7-201ENST00000516664 135 ntBASIC1.66□□□□□ -2.14
LCE4AQ5TA78 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC1.66□□□□□ -2.14
LCE4AQ5TA78 RN7SL176P-201ENST00000580352 264 ntBASIC1.66□□□□□ -2.14
LCE4AQ5TA78 MIR3158-1-201ENST00000583596 81 ntBASIC1.66□□□□□ -2.14
LCE4AQ5TA78 AC008739.3-201ENST00000603262 127 ntBASIC1.66□□□□□ -2.14
LCE4AQ5TA78 ZYXP1-201ENST00000617638 118 ntBASIC1.66□□□□□ -2.14
LCE4AQ5TA78 MIR6516-201ENST00000630554 81 ntBASIC1.66□□□□□ -2.14
LCE4AQ5TA78 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC1.66□□□□□ -2.14
LCE4AQ5TA78 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
LCE4AQ5TA78 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
LCE4AQ5TA78 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC1.66□□□□□ -2.14
LCE4AQ5TA78 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC1.66□□□□□ -2.14
LCE4AQ5TA78 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC1.66□□□□□ -2.14
LCE4AQ5TA78 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
LCE4AQ5TA78 JPX-212ENST00000639185 9658 ntTSL 5 BASIC1.66□□□□□ -2.14
LCE4AQ5TA78 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
LCE4AQ5TA78 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
LCE4AQ5TA78 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC1.66□□□□□ -2.14
LCE4AQ5TA78 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
LCE4AQ5TA78 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
LCE4AQ5TA78 ZRANB1-201ENST00000359653 5695 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
LCE4AQ5TA78 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
LCE4AQ5TA78 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
LCE4AQ5TA78 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC1.66□□□□□ -2.14
LCE4AQ5TA78 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
LCE4AQ5TA78 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
LCE4AQ5TA78 ZNF658B-202ENST00000615961 3375 ntBASIC1.65□□□□□ -2.14
LCE4AQ5TA78 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC1.65□□□□□ -2.14
LCE4AQ5TA78 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.14
LCE4AQ5TA78 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC1.65□□□□□ -2.14
LCE4AQ5TA78 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC1.65□□□□□ -2.14
LCE4AQ5TA78 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
LCE4AQ5TA78 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
LCE4AQ5TA78 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
LCE4AQ5TA78 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC1.65□□□□□ -2.14
LCE4AQ5TA78 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
LCE4AQ5TA78 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC1.65□□□□□ -2.15
LCE4AQ5TA78 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
LCE4AQ5TA78 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.15
LCE4AQ5TA78 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
LCE4AQ5TA78 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
LCE4AQ5TA78 MIR429-201ENST00000362106 83 ntBASIC1.65□□□□□ -2.15
LCE4AQ5TA78 RNU1-94P-201ENST00000362627 173 ntBASIC1.65□□□□□ -2.15
LCE4AQ5TA78 RNU1-83P-201ENST00000363426 164 ntBASIC1.65□□□□□ -2.15
LCE4AQ5TA78 RNU6-112P-201ENST00000363599 104 ntBASIC1.65□□□□□ -2.15
LCE4AQ5TA78 RNA5SP447-201ENST00000363749 119 ntBASIC1.65□□□□□ -2.15
LCE4AQ5TA78 RNA5SP28-201ENST00000363841 119 ntBASIC1.65□□□□□ -2.15
LCE4AQ5TA78 SNORA62.3-201ENST00000365110 153 ntBASIC1.65□□□□□ -2.15
LCE4AQ5TA78 RNU6-203P-201ENST00000384038 104 ntBASIC1.65□□□□□ -2.15
LCE4AQ5TA78 MIR670-201ENST00000390142 98 ntBASIC1.65□□□□□ -2.15
LCE4AQ5TA78 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
LCE4AQ5TA78 RPS12P10-201ENST00000427031 377 ntBASIC1.65□□□□□ -2.15
LCE4AQ5TA78 KRT8P51-201ENST00000438938 274 ntBASIC1.65□□□□□ -2.15
LCE4AQ5TA78 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC1.65□□□□□ -2.15
LCE4AQ5TA78 RN7SL319P-201ENST00000480656 221 ntBASIC1.65□□□□□ -2.15
LCE4AQ5TA78 RN7SL633P-201ENST00000488974 297 ntBASIC1.65□□□□□ -2.15
LCE4AQ5TA78 RNA5SP94-201ENST00000516917 108 ntBASIC1.65□□□□□ -2.15
LCE4AQ5TA78 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC1.65□□□□□ -2.15
LCE4AQ5TA78 MIR3939-201ENST00000582614 106 ntBASIC1.65□□□□□ -2.15
LCE4AQ5TA78 MIR3192-201ENST00000584920 77 ntBASIC1.65□□□□□ -2.15
LCE4AQ5TA78 AC020914.4-201ENST00000597690 277 ntBASIC1.65□□□□□ -2.15
LCE4AQ5TA78 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC1.65□□□□□ -2.15
LCE4AQ5TA78 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
LCE4AQ5TA78 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
LCE4AQ5TA78 ENAH-209ENST00000635051 3308 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.15
LCE4AQ5TA78 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
LCE4AQ5TA78 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC1.65□□□□□ -2.15
LCE4AQ5TA78 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
LCE4AQ5TA78 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.65□□□□□ -2.15
LCE4AQ5TA78 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
LCE4AQ5TA78 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
LCE4AQ5TA78 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
LCE4AQ5TA78 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC1.65□□□□□ -2.15
LCE4AQ5TA78 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
LCE4AQ5TA78 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.65□□□□□ -2.15
LCE4AQ5TA78 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
LCE4AQ5TA78 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms