Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.62□□□□□ -2.15
CLDN20P56880 AC244015.1-201ENST00000622301 99 ntBASIC1.62□□□□□ -2.15
CLDN20P56880 AC084768.2-201ENST00000622736 221 ntBASIC1.62□□□□□ -2.15
CLDN20P56880 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.62□□□□□ -2.15
CLDN20P56880 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
CLDN20P56880 RNU6-414P-201ENST00000363705 104 ntBASIC1.61□□□□□ -2.15
CLDN20P56880 Y_RNA.217-201ENST00000364214 105 ntBASIC1.61□□□□□ -2.15
CLDN20P56880 Y_RNA.275-201ENST00000364726 110 ntBASIC1.61□□□□□ -2.15
CLDN20P56880 Y_RNA.452-201ENST00000384202 108 ntBASIC1.61□□□□□ -2.15
CLDN20P56880 RNU6-662P-201ENST00000384253 104 ntBASIC1.61□□□□□ -2.15
CLDN20P56880 RNU6-1031P-201ENST00000384773 107 ntBASIC1.61□□□□□ -2.15
CLDN20P56880 AL034345.1-201ENST00000407768 123 ntBASIC1.61□□□□□ -2.15
CLDN20P56880 snoU13.23-201ENST00000458863 104 ntBASIC1.61□□□□□ -2.15
CLDN20P56880 SNORD127-201ENST00000458892 86 ntBASIC1.61□□□□□ -2.15
CLDN20P56880 RNU7-34P-201ENST00000459394 64 ntBASIC1.61□□□□□ -2.15
CLDN20P56880 Y_RNA.641-201ENST00000459414 105 ntBASIC1.61□□□□□ -2.15
CLDN20P56880 AC117454.1-201ENST00000491120 168 ntBASIC1.61□□□□□ -2.15
CLDN20P56880 AC024405.2-202ENST00000532731 184 ntBASIC1.61□□□□□ -2.15
CLDN20P56880 AC103810.8-201ENST00000607347 118 ntBASIC1.61□□□□□ -2.15
CLDN20P56880 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.61□□□□□ -2.15
CLDN20P56880 MIR8081-201ENST00000611533 95 ntBASIC1.61□□□□□ -2.15
CLDN20P56880 RNU6-1272P-201ENST00000362776 107 ntBASIC1.6□□□□□ -2.15
CLDN20P56880 RNU6-899P-201ENST00000363947 107 ntBASIC1.6□□□□□ -2.15
CLDN20P56880 U8.7-201ENST00000364940 136 ntBASIC1.6□□□□□ -2.15
CLDN20P56880 RNU6-702P-201ENST00000364982 107 ntBASIC1.6□□□□□ -2.15
CLDN20P56880 RNU6-439P-201ENST00000384188 106 ntBASIC1.6□□□□□ -2.15
CLDN20P56880 RNU6-763P-201ENST00000390865 106 ntBASIC1.6□□□□□ -2.15
CLDN20P56880 RNU2-38P-201ENST00000410856 79 ntBASIC1.6□□□□□ -2.15
CLDN20P56880 RNU2-14P-201ENST00000411053 191 ntBASIC1.6□□□□□ -2.15
CLDN20P56880 RPL31P63-201ENST00000422565 375 ntBASIC1.6□□□□□ -2.15
CLDN20P56880 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.6□□□□□ -2.15
CLDN20P56880 RNU7-141P-201ENST00000459304 62 ntBASIC1.6□□□□□ -2.15
CLDN20P56880 AL049830.1-201ENST00000468034 425 ntBASIC1.6□□□□□ -2.15
CLDN20P56880 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.6□□□□□ -2.15
CLDN20P56880 RNU6-548P-201ENST00000517083 115 ntBASIC1.6□□□□□ -2.15
CLDN20P56880 AC015712.3-201ENST00000559380 164 ntBASIC1.6□□□□□ -2.15
CLDN20P56880 AC127455.1-201ENST00000565496 145 ntBASIC1.6□□□□□ -2.15
CLDN20P56880 DEFB122-202ENST00000569013 197 ntBASIC1.6□□□□□ -2.15
CLDN20P56880 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.6□□□□□ -2.15
CLDN20P56880 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
CLDN20P56880 Y_RNA.14-201ENST00000362415 103 ntBASIC1.59□□□□□ -2.15
CLDN20P56880 RNU6-1048P-201ENST00000364054 107 ntBASIC1.59□□□□□ -2.15
CLDN20P56880 Y_RNA.265-201ENST00000364677 108 ntBASIC1.59□□□□□ -2.15
CLDN20P56880 RNA5SP363-201ENST00000365072 115 ntBASIC1.59□□□□□ -2.15
CLDN20P56880 Y_RNA.352-201ENST00000365439 102 ntBASIC1.59□□□□□ -2.15
CLDN20P56880 RNU6-1080P-201ENST00000383982 107 ntBASIC1.59□□□□□ -2.15
CLDN20P56880 Y_RNA.562-201ENST00000384695 113 ntBASIC1.59□□□□□ -2.15
CLDN20P56880 RNA5SP482-201ENST00000391269 118 ntBASIC1.59□□□□□ -2.15
CLDN20P56880 MTCO2P33-201ENST00000402100 465 ntBASIC1.59□□□□□ -2.15
CLDN20P56880 Y_RNA.621-201ENST00000411065 96 ntBASIC1.59□□□□□ -2.15
CLDN20P56880 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.59□□□□□ -2.15
CLDN20P56880 BTF3P11-201ENST00000426582 477 ntBASIC1.59□□□□□ -2.15
CLDN20P56880 JTBP1-201ENST00000441314 247 ntBASIC1.59□□□□□ -2.15
CLDN20P56880 STAG3L5P-204ENST00000443759 179 ntBASIC1.59□□□□□ -2.15
CLDN20P56880 RNU6-1132P-201ENST00000459214 107 ntBASIC1.59□□□□□ -2.15
CLDN20P56880 Y_RNA.637-201ENST00000459424 114 ntBASIC1.59□□□□□ -2.15
CLDN20P56880 SNORA44.1-201ENST00000517031 108 ntBASIC1.59□□□□□ -2.15
CLDN20P56880 MIR4419B-201ENST00000577260 68 ntBASIC1.59□□□□□ -2.15
CLDN20P56880 MIR3124-201ENST00000582636 67 ntBASIC1.59□□□□□ -2.15
CLDN20P56880 MIR3149-201ENST00000584629 83 ntBASIC1.59□□□□□ -2.15
CLDN20P56880 AC012433.1-201ENST00000588916 398 ntBASIC1.59□□□□□ -2.15
CLDN20P56880 MIR8074-201ENST00000615081 81 ntBASIC1.59□□□□□ -2.15
CLDN20P56880 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
CLDN20P56880 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
CLDN20P56880 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
CLDN20P56880 AC134026.1-201ENST00000623249 2239 ntBASIC1.58□□□□□ -2.16
CLDN20P56880 Y_RNA.193-201ENST00000363979 102 ntBASIC1.58□□□□□ -2.16
CLDN20P56880 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
CLDN20P56880 MIR548H3-201ENST00000408771 118 ntBASIC1.58□□□□□ -2.16
CLDN20P56880 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.58□□□□□ -2.16
CLDN20P56880 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.58□□□□□ -2.16
CLDN20P56880 HMGN2P23-201ENST00000456759 269 ntBASIC1.58□□□□□ -2.16
CLDN20P56880 AC099513.1-201ENST00000490423 301 ntBASIC1.58□□□□□ -2.16
CLDN20P56880 RPL23AP54-201ENST00000495129 419 ntBASIC1.58□□□□□ -2.16
CLDN20P56880 AC108210.2-201ENST00000503681 201 ntBASIC1.58□□□□□ -2.16
CLDN20P56880 MIR4524B-201ENST00000581569 115 ntBASIC1.58□□□□□ -2.16
CLDN20P56880 AC021506.2-201ENST00000612354 169 ntBASIC1.58□□□□□ -2.16
CLDN20P56880 AC013791.1-201ENST00000616619 62 ntBASIC1.58□□□□□ -2.16
CLDN20P56880 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
CLDN20P56880 RNU6-574P-201ENST00000384265 107 ntBASIC1.57□□□□□ -2.16
CLDN20P56880 RNU6-1289P-201ENST00000384431 106 ntBASIC1.57□□□□□ -2.16
CLDN20P56880 MIR30A-201ENST00000385092 71 ntBASIC1.57□□□□□ -2.16
CLDN20P56880 SNORA12.1-201ENST00000390873 148 ntBASIC1.57□□□□□ -2.16
CLDN20P56880 MIR1267-201ENST00000408723 78 ntBASIC1.57□□□□□ -2.16
CLDN20P56880 SNORA36B-201ENST00000410438 131 ntBASIC1.57□□□□□ -2.16
CLDN20P56880 RPL39P38-201ENST00000467018 153 ntBASIC1.57□□□□□ -2.16
CLDN20P56880 OR9P1P-201ENST00000496431 281 ntBASIC1.57□□□□□ -2.16
CLDN20P56880 RNU6-250P-201ENST00000516958 103 ntBASIC1.57□□□□□ -2.16
CLDN20P56880 AC004817.2-201ENST00000561794 651 ntBASIC1.57□□□□□ -2.16
CLDN20P56880 AC005357.1-201ENST00000588399 301 ntBASIC1.57□□□□□ -2.16
CLDN20P56880 AC062037.2-201ENST00000610137 73 ntBASIC1.57□□□□□ -2.16
CLDN20P56880 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.57□□□□□ -2.16
CLDN20P56880 snoU18.1-201ENST00000629629 71 ntBASIC1.57□□□□□ -2.16
CLDN20P56880 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.57□□□□□ -2.16
CLDN20P56880 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
CLDN20P56880 Y_RNA.82-201ENST00000363000 102 ntBASIC1.56□□□□□ -2.16
CLDN20P56880 Y_RNA.92-201ENST00000363043 102 ntBASIC1.56□□□□□ -2.16
CLDN20P56880 Y_RNA.235-201ENST00000364412 102 ntBASIC1.56□□□□□ -2.16
CLDN20P56880 RNU4-41P-201ENST00000364426 143 ntBASIC1.56□□□□□ -2.16
CLDN20P56880 RNU6-740P-201ENST00000364734 105 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 183 ms