Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 SCARNA15.3-201ENST00000626315 122 ntBASIC2.37□□□□□ -2.03
WNT3AP56704 SCARNA4.1-201ENST00000628597 123 ntBASIC2.37□□□□□ -2.03
WNT3AP56704 ZNF271P-202ENST00000465539 1970 ntBASIC2.36□□□□□ -2.03
WNT3AP56704 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.36□□□□□ -2.03
WNT3AP56704 Y_RNA.111-201ENST00000363248 100 ntBASIC2.36□□□□□ -2.03
WNT3AP56704 RNU6-1336P-201ENST00000383886 109 ntBASIC2.36□□□□□ -2.03
WNT3AP56704 MIR515-2-201ENST00000384883 83 ntBASIC2.36□□□□□ -2.03
WNT3AP56704 MIR515-1-201ENST00000384884 83 ntBASIC2.36□□□□□ -2.03
WNT3AP56704 RNU11-3P-201ENST00000391111 133 ntBASIC2.36□□□□□ -2.03
WNT3AP56704 SNORA11.4-201ENST00000408823 129 ntBASIC2.36□□□□□ -2.03
WNT3AP56704 RNA5SP270-201ENST00000411361 118 ntBASIC2.36□□□□□ -2.03
WNT3AP56704 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.36□□□□□ -2.03
WNT3AP56704 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.36□□□□□ -2.03
WNT3AP56704 AC018634.1-201ENST00000437554 401 ntBASIC2.36□□□□□ -2.03
WNT3AP56704 AL513328.1-201ENST00000446460 224 ntBASIC2.36□□□□□ -2.03
WNT3AP56704 AC023449.1-201ENST00000454464 154 ntBASIC2.36□□□□□ -2.03
WNT3AP56704 SNORD11-201ENST00000459124 84 ntBASIC2.36□□□□□ -2.03
WNT3AP56704 RNA5SP24-201ENST00000516478 95 ntBASIC2.36□□□□□ -2.03
WNT3AP56704 AC112693.2-201ENST00000556538 232 ntBASIC2.36□□□□□ -2.03
WNT3AP56704 SNORD14A-201ENST00000606526 91 ntBASIC2.36□□□□□ -2.03
WNT3AP56704 uc_338.4-201ENST00000616635 176 ntBASIC2.36□□□□□ -2.03
WNT3AP56704 MIR6844-201ENST00000637122 62 ntBASIC2.36□□□□□ -2.03
WNT3AP56704 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.36□□□□□ -2.03
WNT3AP56704 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
WNT3AP56704 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
WNT3AP56704 SNORA12.1-201ENST00000390873 148 ntBASIC2.35□□□□□ -2.03
WNT3AP56704 MLLT10P1-201ENST00000418346 262 ntBASIC2.35□□□□□ -2.03
WNT3AP56704 RPL30P13-201ENST00000418873 348 ntBASIC2.35□□□□□ -2.03
WNT3AP56704 RPS27P1-201ENST00000450552 247 ntBASIC2.35□□□□□ -2.03
WNT3AP56704 RNU6-1299P-201ENST00000516316 100 ntBASIC2.35□□□□□ -2.03
WNT3AP56704 RNA5SP137-201ENST00000516833 135 ntBASIC2.35□□□□□ -2.03
WNT3AP56704 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.35□□□□□ -2.03
WNT3AP56704 AC022513.1-201ENST00000624512 117 ntBASIC2.35□□□□□ -2.03
WNT3AP56704 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.35□□□□□ -2.03
WNT3AP56704 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.34□□□□□ -2.03
WNT3AP56704 Y_RNA.91-201ENST00000363042 107 ntBASIC2.34□□□□□ -2.03
WNT3AP56704 RNU6-484P-201ENST00000384016 107 ntBASIC2.34□□□□□ -2.03
WNT3AP56704 SNORA67.4-201ENST00000384688 142 ntBASIC2.34□□□□□ -2.03
WNT3AP56704 RNU6-257P-201ENST00000410238 98 ntBASIC2.34□□□□□ -2.03
WNT3AP56704 RNU6-588P-201ENST00000410281 105 ntBASIC2.34□□□□□ -2.03
WNT3AP56704 RNU4-43P-201ENST00000410628 137 ntBASIC2.34□□□□□ -2.03
WNT3AP56704 RNU2-70P-201ENST00000410718 179 ntBASIC2.34□□□□□ -2.03
WNT3AP56704 RNU7-149P-201ENST00000516739 59 ntBASIC2.34□□□□□ -2.03
WNT3AP56704 RNU6-341P-201ENST00000516973 96 ntBASIC2.34□□□□□ -2.03
WNT3AP56704 MIR5007-201ENST00000583098 95 ntBASIC2.34□□□□□ -2.03
WNT3AP56704 AL137847.3-201ENST00000611521 109 ntBASIC2.34□□□□□ -2.03
WNT3AP56704 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.34□□□□□ -2.03
WNT3AP56704 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
WNT3AP56704 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
WNT3AP56704 ICE2P2-201ENST00000483823 2787 ntBASIC2.33□□□□□ -2.04
WNT3AP56704 AC010332.2-201ENST00000613083 1904 ntBASIC2.33□□□□□ -2.04
WNT3AP56704 RNA5SP289-201ENST00000362332 137 ntBASIC2.33□□□□□ -2.04
WNT3AP56704 SNORA1B-201ENST00000362535 133 ntBASIC2.33□□□□□ -2.04
WNT3AP56704 Y_RNA.253-201ENST00000364562 112 ntBASIC2.33□□□□□ -2.04
WNT3AP56704 Y_RNA.393-201ENST00000383936 102 ntBASIC2.33□□□□□ -2.04
WNT3AP56704 RNU1-52P-201ENST00000384190 164 ntBASIC2.33□□□□□ -2.04
WNT3AP56704 SNRPGP10-201ENST00000432323 225 ntBASIC2.33□□□□□ -2.04
WNT3AP56704 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.33□□□□□ -2.04
WNT3AP56704 SNORD77.4-201ENST00000516158 81 ntBASIC2.33□□□□□ -2.04
WNT3AP56704 RNU6-197P-201ENST00000516680 100 ntBASIC2.33□□□□□ -2.04
WNT3AP56704 RNU2-56P-201ENST00000516826 190 ntBASIC2.33□□□□□ -2.04
WNT3AP56704 AC024995.1-201ENST00000523014 93 ntBASIC2.33□□□□□ -2.04
WNT3AP56704 MIR5094-201ENST00000578766 85 ntBASIC2.33□□□□□ -2.04
WNT3AP56704 MIR378D2-201ENST00000580636 98 ntBASIC2.33□□□□□ -2.04
WNT3AP56704 AC005786.1-201ENST00000588553 154 ntBASIC2.33□□□□□ -2.04
WNT3AP56704 AC120024.3-201ENST00000603167 156 ntBASIC2.33□□□□□ -2.04
WNT3AP56704 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
WNT3AP56704 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
WNT3AP56704 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
WNT3AP56704 RNY1P11-201ENST00000363759 113 ntBASIC2.32□□□□□ -2.04
WNT3AP56704 Y_RNA.420-201ENST00000384043 110 ntBASIC2.32□□□□□ -2.04
WNT3AP56704 Y_RNA.586-201ENST00000391146 98 ntBASIC2.32□□□□□ -2.04
WNT3AP56704 RNU6-460P-201ENST00000391158 108 ntBASIC2.32□□□□□ -2.04
WNT3AP56704 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.32□□□□□ -2.04
WNT3AP56704 SNORA59A-201ENST00000459326 152 ntBASIC2.32□□□□□ -2.04
WNT3AP56704 RNU7-94P-201ENST00000459576 63 ntBASIC2.32□□□□□ -2.04
WNT3AP56704 RPS26P45-201ENST00000471748 340 ntBASIC2.32□□□□□ -2.04
WNT3AP56704 HMGN1P7-201ENST00000491722 313 ntBASIC2.32□□□□□ -2.04
WNT3AP56704 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.32□□□□□ -2.04
WNT3AP56704 MIR5194-201ENST00000582634 120 ntBASIC2.32□□□□□ -2.04
WNT3AP56704 AC022217.4-201ENST00000604389 163 ntBASIC2.32□□□□□ -2.04
WNT3AP56704 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.32□□□□□ -2.04
WNT3AP56704 Pinc.1-201ENST00000616452 154 ntBASIC2.32□□□□□ -2.04
WNT3AP56704 MIR6766-201ENST00000622641 72 ntBASIC2.32□□□□□ -2.04
WNT3AP56704 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
WNT3AP56704 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
WNT3AP56704 MIR126-201ENST00000362291 85 ntBASIC2.31□□□□□ -2.04
WNT3AP56704 RNU6-1082P-201ENST00000364574 107 ntBASIC2.31□□□□□ -2.04
WNT3AP56704 SNORD113-1-201ENST00000365321 69 ntBASIC2.31□□□□□ -2.04
WNT3AP56704 RNU6-81P-201ENST00000365608 104 ntBASIC2.31□□□□□ -2.04
WNT3AP56704 MIR562-201ENST00000384894 95 ntBASIC2.31□□□□□ -2.04
WNT3AP56704 RNA5SP109-201ENST00000391010 116 ntBASIC2.31□□□□□ -2.04
WNT3AP56704 AC007064.1-201ENST00000412238 351 ntBASIC2.31□□□□□ -2.04
WNT3AP56704 AC245047.3-201ENST00000429428 127 ntBASIC2.31□□□□□ -2.04
WNT3AP56704 HMGN2P3-201ENST00000433603 273 ntBASIC2.31□□□□□ -2.04
WNT3AP56704 HMGN2P5-201ENST00000436882 273 ntBASIC2.31□□□□□ -2.04
WNT3AP56704 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.31□□□□□ -2.04
WNT3AP56704 AL606517.2-201ENST00000442855 241 ntBASIC2.31□□□□□ -2.04
WNT3AP56704 AL049830.1-201ENST00000468034 425 ntBASIC2.31□□□□□ -2.04
WNT3AP56704 NDUFA4P2-201ENST00000489989 244 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms