Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
MRE11P49959 RNU1-23P-201ENST00000363361 144 ntBASIC2.7□□□□□ -1.98
MRE11P49959 RNU1-52P-201ENST00000384190 164 ntBASIC2.7□□□□□ -1.98
MRE11P49959 SNORA64-201ENST00000384674 134 ntBASIC2.7□□□□□ -1.98
MRE11P49959 AC008134.1-201ENST00000420943 193 ntBASIC2.7□□□□□ -1.98
MRE11P49959 AL161788.1-201ENST00000441805 169 ntBASIC2.7□□□□□ -1.98
MRE11P49959 AC010531.2-201ENST00000465012 153 ntBASIC2.7□□□□□ -1.98
MRE11P49959 AC010409.1-201ENST00000487382 476 ntBASIC2.7□□□□□ -1.98
MRE11P49959 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.7□□□□□ -1.98
MRE11P49959 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.7□□□□□ -1.98
MRE11P49959 RNU2-34P-201ENST00000516534 121 ntBASIC2.7□□□□□ -1.98
MRE11P49959 RNU6-63P-201ENST00000516690 95 ntBASIC2.7□□□□□ -1.98
MRE11P49959 POLR3GP1-201ENST00000594073 261 ntBASIC2.7□□□□□ -1.98
MRE11P49959 AC005972.2-201ENST00000604690 348 ntBASIC2.7□□□□□ -1.98
MRE11P49959 U4.3-201ENST00000621047 82 ntBASIC2.7□□□□□ -1.98
MRE11P49959 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.7□□□□□ -1.98
MRE11P49959 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
MRE11P49959 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
MRE11P49959 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
MRE11P49959 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.69□□□□□ -1.98
MRE11P49959 RNU6-1240P-201ENST00000365155 104 ntBASIC2.69□□□□□ -1.98
MRE11P49959 MIR569-201ENST00000385228 96 ntBASIC2.69□□□□□ -1.98
MRE11P49959 RNU6-1228P-201ENST00000391014 107 ntBASIC2.69□□□□□ -1.98
MRE11P49959 AL606845.1-201ENST00000404881 255 ntBASIC2.69□□□□□ -1.98
MRE11P49959 RNU6-426P-201ENST00000516464 97 ntBASIC2.69□□□□□ -1.98
MRE11P49959 RNU7-116P-201ENST00000516940 62 ntBASIC2.69□□□□□ -1.98
MRE11P49959 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.69□□□□□ -1.98
MRE11P49959 MIR548AI-201ENST00000579940 88 ntBASIC2.69□□□□□ -1.98
MRE11P49959 AC012640.5-201ENST00000623897 319 ntBASIC2.69□□□□□ -1.98
MRE11P49959 RNU6-743P-201ENST00000364151 106 ntBASIC2.68□□□□□ -1.98
MRE11P49959 RNU6-117P-201ENST00000365415 107 ntBASIC2.68□□□□□ -1.98
MRE11P49959 MIR15B-201ENST00000385045 98 ntBASIC2.68□□□□□ -1.98
MRE11P49959 RNU6-220P-201ENST00000390919 107 ntBASIC2.68□□□□□ -1.98
MRE11P49959 RNU6-321P-201ENST00000410912 106 ntBASIC2.68□□□□□ -1.98
MRE11P49959 MTCO1P44-201ENST00000441935 243 ntBASIC2.68□□□□□ -1.98
MRE11P49959 AL121914.1-201ENST00000450188 156 ntBASIC2.68□□□□□ -1.98
MRE11P49959 CYP2C59P-201ENST00000457790 269 ntBASIC2.68□□□□□ -1.98
MRE11P49959 RNU6-561P-201ENST00000516222 102 ntBASIC2.68□□□□□ -1.98
MRE11P49959 SNORA48.11-201ENST00000517015 89 ntBASIC2.68□□□□□ -1.98
MRE11P49959 MIR548X2-201ENST00000579776 100 ntBASIC2.68□□□□□ -1.98
MRE11P49959 DNAJC19P2-201ENST00000593340 302 ntBASIC2.68□□□□□ -1.98
MRE11P49959 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.68□□□□□ -1.98
MRE11P49959 AC091895.1-201ENST00000624494 256 ntBASIC2.68□□□□□ -1.98
MRE11P49959 MIR3658-201ENST00000636291 56 ntBASIC2.68□□□□□ -1.98
MRE11P49959 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
MRE11P49959 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
MRE11P49959 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.67□□□□□ -1.98
MRE11P49959 RNU6-376P-201ENST00000384731 106 ntBASIC2.67□□□□□ -1.98
MRE11P49959 Y_RNA.586-201ENST00000391146 98 ntBASIC2.67□□□□□ -1.98
MRE11P49959 RNA5SP511-201ENST00000410487 115 ntBASIC2.67□□□□□ -1.98
MRE11P49959 RNU2-48P-201ENST00000410694 191 ntBASIC2.67□□□□□ -1.98
MRE11P49959 AC006461.1-201ENST00000412637 326 ntBASIC2.67□□□□□ -1.98
MRE11P49959 AL357134.1-201ENST00000445848 426 ntBASIC2.67□□□□□ -1.98
MRE11P49959 RPL23AP54-201ENST00000495129 419 ntBASIC2.67□□□□□ -1.98
MRE11P49959 RNA5SP272-201ENST00000516095 111 ntBASIC2.67□□□□□ -1.98
MRE11P49959 MIR4658-201ENST00000584344 65 ntBASIC2.67□□□□□ -1.98
MRE11P49959 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.67□□□□□ -1.98
MRE11P49959 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
MRE11P49959 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
MRE11P49959 RNU1-17P-201ENST00000363022 152 ntBASIC2.66□□□□□ -1.98
MRE11P49959 Y_RNA.332-201ENST00000365271 113 ntBASIC2.66□□□□□ -1.98
MRE11P49959 RNU4-11P-201ENST00000365287 132 ntBASIC2.66□□□□□ -1.98
MRE11P49959 Y_RNA.337-201ENST00000365312 102 ntBASIC2.66□□□□□ -1.98
MRE11P49959 RNU6-643P-201ENST00000384018 107 ntBASIC2.66□□□□□ -1.98
MRE11P49959 RNU4-52P-201ENST00000384209 138 ntBASIC2.66□□□□□ -1.98
MRE11P49959 RNU6-1117P-201ENST00000384525 104 ntBASIC2.66□□□□□ -1.98
MRE11P49959 RNU6-1081P-201ENST00000384537 107 ntBASIC2.66□□□□□ -1.98
MRE11P49959 RNU6-959P-201ENST00000384671 107 ntBASIC2.66□□□□□ -1.98
MRE11P49959 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
MRE11P49959 MIR1278-201ENST00000408753 81 ntBASIC2.66□□□□□ -1.98
MRE11P49959 HMGN2P38-201ENST00000423806 265 ntBASIC2.66□□□□□ -1.98
MRE11P49959 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.66□□□□□ -1.98
MRE11P49959 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.66□□□□□ -1.98
MRE11P49959 RNU6-717P-201ENST00000459076 104 ntBASIC2.66□□□□□ -1.98
MRE11P49959 RNU6-437P-201ENST00000459408 95 ntBASIC2.66□□□□□ -1.98
MRE11P49959 RPS27P22-201ENST00000478056 241 ntBASIC2.66□□□□□ -1.98
MRE11P49959 AC093259.1-201ENST00000509755 300 ntBASIC2.66□□□□□ -1.98
MRE11P49959 AC015720.1-201ENST00000565251 277 ntBASIC2.66□□□□□ -1.98
MRE11P49959 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.66□□□□□ -1.98
MRE11P49959 CENPCP1-201ENST00000533085 2578 ntBASIC2.66□□□□□ -1.98
MRE11P49959 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
MRE11P49959 RNU6-674P-201ENST00000363831 107 ntBASIC2.65□□□□□ -1.99
MRE11P49959 Y_RNA.224-201ENST00000364308 111 ntBASIC2.65□□□□□ -1.99
MRE11P49959 RNU6-728P-201ENST00000365375 104 ntBASIC2.65□□□□□ -1.99
MRE11P49959 RNY3P5-201ENST00000384127 102 ntBASIC2.65□□□□□ -1.99
MRE11P49959 RNU6-257P-201ENST00000410238 98 ntBASIC2.65□□□□□ -1.99
MRE11P49959 RNA5SP338-201ENST00000410495 85 ntBASIC2.65□□□□□ -1.99
MRE11P49959 RNU2-63P-201ENST00000410792 194 ntBASIC2.65□□□□□ -1.99
MRE11P49959 AC123900.1-201ENST00000420390 96 ntBASIC2.65□□□□□ -1.99
MRE11P49959 AC010154.1-201ENST00000425857 269 ntBASIC2.65□□□□□ -1.99
MRE11P49959 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.65□□□□□ -1.99
MRE11P49959 RN7SL636P-201ENST00000497504 294 ntBASIC2.65□□□□□ -1.99
MRE11P49959 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.65□□□□□ -1.99
MRE11P49959 MIR340-201ENST00000362125 95 ntBASIC2.64□□□□□ -1.99
MRE11P49959 RNY1P10-201ENST00000363268 113 ntBASIC2.64□□□□□ -1.99
MRE11P49959 RNU1-22P-201ENST00000363334 158 ntBASIC2.64□□□□□ -1.99
MRE11P49959 RNA5SP138-201ENST00000365098 114 ntBASIC2.64□□□□□ -1.99
MRE11P49959 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.64□□□□□ -1.99
MRE11P49959 AC245884.12-201ENST00000615364 59 ntBASIC2.64□□□□□ -1.99
MRE11P49959 U4atac.1-201ENST00000618345 95 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms